Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4964 ATGACATTTACCTCAGAAGAGGAAGTTACCTTGTATTACATGAATTATGCTCGACATATGGGTTTTGGAATGAGTAAAATAAGTTCAAAAAATGGTGATGATGGGAAAAAATATTTTACTTTAGCATGTAGTCGTGCAGGGATGTACGTGAGCACTTCAAAGAATCTTTTGAAGCTAAATCCTATCACTAAAACACAATGTAAGGCAAGATTGAATGCATGTATAGGTTTGGATGGAAGAGTTGTAGTTACAAGTGTTATTCTTGACCATAATCATGACCTTATCCCAAACAAAGCACGATATTTTAGATGTAACAAGAATATGGGGTCTCACATAAAAAGGAGATTAGAGATTAATGATCAAGCAGGTATCAATGTCAGTAGAAATTTTAGATCTGTGGTTGTTGAAGCAAATGGTTATGAGAATCTCACATTTGGTGAAAAAGACTGCAGAAACTATATAGACAAGATAAGGCGGCTAAGGCTTGGGACAGGAGACGCTGAAGCAATACAAAACTATTTTGTTAGAATGCAAAAGCAAAATAGTCAATTTTATTATGTAATGGATGTGGATGATGATAGCCGTTTAAGAAATGTATTCTGGGCAGATGCGAGAAGTAGGGCTGCATATGAATACTTTGGTGAAGTCATAACTTTTGACACCACCTACTTAACAAACAAATATGACATGCCTTTTGCCTCTTTTGTTGGTGTCAATCATCACGGTCAGTCCGTGTTGTTGGGTTGTGCGCTCTTATCAAACGAAGATGCTAAAACTTTTACTTGGTTGTTCATAACTTGGTTAGAATGCATGTATGGACGCGCTCCAAATGCCATTATTACTGATCAGGATAAGGCAATGAAAAAGGCGATTGAGGTTGTCTTCCCAAAAGCTTGTCACAGATGGCACTCAGATTATGAGTCTATTAAAATACTTTTTCATGATGTTGTATATGATTCTTTGAGCAAAAGTGATTTCAAAGAGAGGTGGGAAAAAATGATTGAATGTTATGAACTACATGATAATGAATGGTTAAAAGGGATATTTGATGAGCGACATCGTTGGGTTCCCGTGTATGTGAGGGACGTGTTTTGGGCCGGGATGTCAACAACACAACGAAGTGAAAGTATGAACTCATTTTTTGATGGGTATGTAAGTTTAAAGACATCATTGAAGCAATTTGTTGAACAATATGACAATGCATTGAAAGATAAGATTGAAAAGGAAAGCAGGGCTGATTTTGGTTCATTTAATTCAGTAATTGCTTGTGTAAGTCATTTTGGCTTTGAGTCACAATTTCAAAAATCATTTACCAATGCAAAATTCAAAGAATTTCAAGTAGAAGTTGCTTCTATGATGTATTGCAATACTTCATTTGAGGAATTGGAGGGTTTAAATTCTATATTTTCTGTGATAGAAAGTAAGAAAGTATATGAGAAAACAAAAGATGTGGTATTCAAGGTGTCCTTCAATGAAAATGACTTTGAGTTACAATGTGCCTGCTGCTTATTTGAGTTTAAAGGCATTTTGTGTAGACACATCATTTGTGTGCTTAAACTCTCTGGTAAAACAGAGTCAGTGCCATCTCATTATATTTTTTCTCAGTGGAGGAAGGATATAAAGCGACGACATATACTTATTAAATGTGGTTTTGATAACTTGAATGGAAATGCTGAGCTACAACGTGTTGGTAAAGCATGTGATGCATTTTACGAAGTTGCTTCTACGGGGATAGGTACTGAAGAAGATTTATTGAAAGTGATGAATTGGATCAAGGACTTGAAAATTGAGTTAACATGTAAAAAAACATCTCCTATAATTATAGAAGAAGTTAATTCAACTCAAAATCAAGTGCATATCATTCTGGATCCCGAAGTTGCTCGAGGCAAAGGGCGTCCTCCTTCAAAACAAAAGGCTTCTAAAGTTGATCAAATTATAAAGAAGAAGCTTGCAGGAAAGAAAACTCAAAGTAGCCAAAAAAGAACAGTTTCTCAAAGTTAA 2001 0.3533 MTFTSEEEVTLYYMNYARHMGFGMSKISSKNGDDGKKYFTLACSRAGMYVSTSKNLLKLNPITKTQCKARLNACIGLDGRVVVTSVILDHNHDLIPNKARYFRCNKNMGSHIKRRLEINDQAGINVSRNFRSVVVEANGYENLTFGEKDCRNYIDKIRRLRLGTGDAEAIQNYFVRMQKQNSQFYYVMDVDDDSRLRNVFWADARSRAAYEYFGEVITFDTTYLTNKYDMPFASFVGVNHHGQSVLLGCALLSNEDAKTFTWLFITWLECMYGRAPNAIITDQDKAMKKAIEVVFPKACHRWHSDYESIKILFHDVVYDSLSKSDFKERWEKMIECYELHDNEWLKGIFDERHRWVPVYVRDVFWAGMSTTQRSESMNSFFDGYVSLKTSLKQFVEQYDNALKDKIEKESRADFGSFNSVIACVSHFGFESQFQKSFTNAKFKEFQVEVASMMYCNTSFEELEGLNSIFSVIESKKVYEKTKDVVFKVSFNENDFELQCACCLFEFKGILCRHIICVLKLSGKTESVPSHYIFSQWRKDIKRRHILIKCGFDNLNGNAELQRVGKACDAFYEVASTGIGTEEDLLKVMNWIKDLKIELTCKKTSPIIIEEVNSTQNQVHIILDPEVARGKGRPPSKQKASKVDQIIKKKLAGKKTQSSQKRTVSQS* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4964 666 ProSiteProfiles Zinc finger SWIM-type profile. 486 522 IPR007527 GO:0008270
Mal1g4964 666 SMART 26again6 497 524 IPR006564 GO:0008270
Mal1g4964 666 Pfam MULE transposase domain 216 302 IPR018289 -
Mal1g4964 666 Pfam SWIM zinc finger 493 517 IPR007527 GO:0008270
Mal1g4964 666 PANTHER OS03G0843700 PROTEIN 1 561 - -
Mal1g4964 666 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 561 IPR031052 GO:0006355
Mal1g4964 666 Pfam FAR1 DNA-binding domain 12 95 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4964 Mal-Chr1 119884101 119886145 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g4964 MULE 3.7e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4964 - - cam:101506732 982.63