Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4944 ATGGAACCTCTTCTTATTGAGGTCCCTATAGGAAAAGATGTTTTGGAGACGCTCCTCAACTTGGCTCGTTGTCATCAAGCTGGAATAACTGTGTTGAGTGGTTTTGGTTCAATTTCTGAAGTTACCCTTCTCAACCCTATAACTTGTGTCCCTGCTTTCCCCCTCAAAGGAATGTTCAATATGACATCTCTCTCCGGAACTTACATCAATGCCAGTGGTGTTTATGTTCCTCCTAGGTTCATGAAAACTAATCCAACATATTCATCTTTCTCCGTTATCCTCTCTAGCAATCAAGGAAAAGTGTTTGGTGGAATTATTGGAGGGAAGATTATAGCTGCTGGTGGTGTTTCAATCATAGCCACTCTTTTTAAGAAACCAGCATTTCATAGGATGGGTGTTGTCAATGGAAATGTTCGTGAAATAATGGAGGATGAGCCAATTCATGCTGGTGGTGTTATCATCAATTTTGATCGAAGGGCACAATAA 486 0.4074 MEPLLIEVPIGKDVLETLLNLARCHQAGITVLSGFGSISEVTLLNPITCVPAFPLKGMFNMTSLSGTYINASGVYVPPRFMKTNPTYSSFSVILSSNQGKVFGGIIGGKIIAAGGVSIIATLFKKPAFHRMGVVNGNVREIMEDEPIHAGGVIINFDRRAQ* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4944 161 ProSiteProfiles PPC domain profile profile. 1 144 IPR005175 -
Mal1g4944 161 Gene3D - 3 149 - -
Mal1g4944 161 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 135 - -
Mal1g4944 161 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 124 IPR005175 -
Mal1g4944 161 CDD DUF296 3 102 IPR005175 -
Mal1g4944 161 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 131 - -
Mal1g4944 161 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 135 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4944 Mal-Chr1 119580879 119581364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4944 1 151 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 35.220 1.69e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4944 - - mtr:MTR_1g032910 218.779