Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4931 ATGAAGTGTTCCATATCCGTAATTGCTGCTGCTCTAGGTCCAGGGATTTCTGGCTTTATAACAGCACAAGGGAGAATAAATCAAAATGATGCAAATGGTTTTGTTTTTAAGAATTGTAATGTATATGGAGATGGTACAACATACTTAGGAAGACCATGGAGAGAATATGCTAGAGTTCTATTCTACAATACCAATATGTCCAACATAGTACTGCCTATTGGTTGGTATCCATGGTATTTCGTCGGCCACGAGGACCACATACAATTCGCAGAGTATGGAAATTTTGGACCTGGCTCTAAAACAAAGAATCGAGTGAAATGGATGAAGAAGTTGGATTTGGCAACTGTTAATAAAATGACGAGTGTTAGTTTTGTTGATAATGAAGGATGGCTTAATGTAGCTTCAAAAATCAACTAA 417 0.3717 MKCSISVIAAALGPGISGFITAQGRINQNDANGFVFKNCNVYGDGTTYLGRPWREYARVLFYNTNMSNIVLPIGWYPWYFVGHEDHIQFAEYGNFGPGSKTKNRVKWMKKLDLATVNKMTSVSFVDNEGWLNVASKIN* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4931 138 Gene3D - 1 137 IPR012334 -
Mal1g4931 138 PANTHER PECTINESTERASE 10-RELATED 2 133 - -
Mal1g4931 138 Pfam Pectinesterase 14 126 IPR000070 GO:0030599|GO:0042545
Mal1g4931 138 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 133 - -
Mal1g4931 138 SUPERFAMILY Pectin lyase-like 12 133 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4931 Mal-Chr1 119174298 119176072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4931 3 134 Carbohydrate Esterase AT1G05310 34.815 2.67e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4931 - - gmx:100812950 212.616