Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4910 ATGATGATTCCAAATTTGAACTTGGAAGCTGAAAATAGTTTAGAAGTAAGCAGTCAAGTAGGTTCGAACGTATACTTACAAGAAACATCTCATGATCTTACCAAAGACAGTGCCACAACTTCTTGTCTTACTAAGTCTGACTTTAATCCAGATTCTGTTTCCCTTGACCTGACTCTCAACTTCGATCCGAGCAACGAATATTTGAAGGAAACAAGTGACACTAACAGTGAAGTAGTAGGAGCTGATCAGGCTCATAATTCTGTTCCAGCACCAACAGTTCATAGAGTTTTCTCTTGTAATTATTGTAGAAGGAAATTCTTTAGCTCACAAGCATTAGGTGGACATCAGAATGCTCATAAAAGGGAGAGAACAATGGCGAAGCGCGCTATGCGAATAGGGATGTTTACCGAAAGGTATACGAGCTTAGCTTCTTTACCTCTTCATGGTTCCTCTTCTTTTCATTCTCTTGGTATTCAAGCTCATGCTGCAATGCACCAAAACCACATGCCATCATCGTCGTCGACAATGAGGGTTCATGATATGAGAGCTACGGCGAAATTCGAGAAAGATTGTTACGGAGCAGCACCGATGTTTATGCATAATGATGATGTTGAAGGTGTATTTTGGCCTGGAAGTTTCAGGCAGATAGATCAAAGTGTTCAAAATTCAAATTTGAATCATATTTCAAATTTGAATAGTAATTTTGTAGCAACAGAACCTCCTCAACAAAAATTTACTACATGTCCTGATCTCACTTTGAGGCTTTAA 768 0.3893 MMIPNLNLEAENSLEVSSQVGSNVYLQETSHDLTKDSATTSCLTKSDFNPDSVSLDLTLNFDPSNEYLKETSDTNSEVVGADQAHNSVPAPTVHRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRIGMFTERYTSLASLPLHGSSSFHSLGIQAHAAMHQNHMPSSSSTMRVHDMRATAKFEKDCYGAAPMFMHNDDVEGVFWPGSFRQIDQSVQNSNLNHISNLNSNFVATEPPQQKFTTCPDLTLRL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4910 255 Gene3D Classic Zinc Finger 73 143 - -
Mal1g4910 255 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Mal1g4910 255 PANTHER ZINC FINGER PROTEIN 3-RELATED 6 255 - -
Mal1g4910 255 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Mal1g4910 255 PANTHER ZINC FINGER PROTEIN JAGGED 6 255 IPR045320 GO:0003700
Mal1g4910 255 SUPERFAMILY beta-beta-alpha zinc fingers 95 125 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4910 Mal-Chr1 118473968 118474735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4910 91 255 C2H2 Transcription Factor Family AT1G66140 41.711 6.12e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g4910 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4910 - - cam:101511411 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4910 1 118473968 118474735 Mal1g4910 1 118473968 118474735 ECH