Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4896 ATGTTCAGAGGTGGGTATGAGGAAGATGTTGACGAAGGTGATGATATTGTTGATTCGGGCAATGGTGGGAATGATAAGAATTCGAGGCAAGTTTTTCATAAGAAGTTGGAAGGTAGGAATCTTGCAAGGGAGAGGTGTATAAACTATGGGATTGAGGTTAGGGTTATTCGCGGTGTAAGGTATGAGGGTTTTTCTTCTACTTCGGGTAAGGTTAATATTTTTGATGGATTGTATAGGATTATTGAATGTTGGTTTGATGTTGGTAAAAGTGGTTTTGGTATTTATAAGTTTAAGTTATGGAGGATTGATGGTCAAGCTAAGATGGGTAGTTTGATCGTTTATGTTATAATTATGTGTGTTTTGTCTCTTGATATTTCAAATGGGAAGAAGAGTGTCGACATAAGGCTTTTTAATGATATTGATAGATGTAATGATCCAATGAGTTTTAAGTATCTTCCTAAGGCTACTTTTATGCATATTGGTTTTCCTTATGAAAGTGTGAGGGGAACATGTTGTAAATGCATGGGCGATTGTGGGGAAAGATGCGTTTTTTGCATGAAAAATGGAAACGACTTTCCTTATAGTCAAAGCGGGATTCTCTTGAAAGGAAAACCATTAATTTTTGAATTCGGTCATTTTTGTAGTTGGCTTCCTCCTTGTAGGAACATTGTTACTCAAAAAGGGCTCAAACATAGGTTGTCATTAGACCTTATTCAAGCTGGCACATGTATATTTGAGTACACTAGAATTGTTCTAGCAAGAGAGATATTACTATTTTCAAATAGGCGGACAAAATGGAGAAATTTGTCTCTGATACAAGATAGTTATGCGTCTTCATCCTATCCATCCATTCCTCCTTTGGATTTTGCCATGGATATGTCTAGAATGAGGAATGTGGCTTGCTATATAAGTCATATCTCAACTCCTAATGTGATGGTTCAATTTGTTTTGCATGATCACAAACATTATGTTGTTTGCGATGGAGAAGAAAGCACGCAATACATTAGGCTCTGA 1014 0.3649 MFRGGYEEDVDEGDDIVDSGNGGNDKNSRQVFHKKLEGRNLARERCINYGIEVRVIRGVRYEGFSSTSGKVNIFDGLYRIIECWFDVGKSGFGIYKFKLWRIDGQAKMGSLIVYVIIMCVLSLDISNGKKSVDIRLFNDIDRCNDPMSFKYLPKATFMHIGFPYESVRGTCCKCMGDCGERCVFCMKNGNDFPYSQSGILLKGKPLIFEFGHFCSWLPPCRNIVTQKGLKHRLSLDLIQAGTCIFEYTRIVLAREILLFSNRRTKWRNLSLIQDSYASSSYPSIPPLDFAMDMSRMRNVACYISHISTPNVMVQFVLHDHKHYVVCDGEESTQYIRL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4896 337 Pfam SAD/SRA domain 3 105 IPR003105 -
Mal1g4896 337 Gene3D - 1 113 IPR036987 -
Mal1g4896 337 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 3 323 - -
Mal1g4896 337 MobiDBLite consensus disorder prediction 1 28 - -
Mal1g4896 337 Gene3D SET domain 114 326 IPR046341 -
Mal1g4896 337 SUPERFAMILY SET domain 119 323 IPR046341 -
Mal1g4896 337 SMART preset_2 122 215 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g4896 337 Pfam Pre-SET motif 125 222 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g4896 337 ProSiteProfiles YDG domain profile. 1 101 IPR003105 -
Mal1g4896 337 SUPERFAMILY PUA domain-like 3 113 IPR015947 -
Mal1g4896 337 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 3 323 - -
Mal1g4896 337 SMART G9a_1 1 105 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4896 Mal-Chr1 117966798 117967926 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4896 4 319 Su(var)3-9 homologs AT1G73100 30.919 1.96e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4896 K11420 - gmx:100795514 389.423