Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4893 ATGTTCTCAGAGTTTCCTTCGAGTCTCAACAGAGTCAACCTTCAGATTCTCAAGAGTTGTGTCAACAAGCTCCTTGAGGTTATCCTATTGTTCAATATAATTTTCCAAATAGGTGGGTATGAGGAAGATGTTGACGAAAGTGATAGTATTGTCTATTCGGAGCATGGTGGGAAGGATAAGAATTCGAGACAAGTTTTTCATCTGAAGTTGGAAGGTAGGAATCTTGCTATGGAGAGGAGTATAAATTATGGGATTGAGGTAAGGGTTATTCGCGGTGTAAGGTATGAGGGTTAG 294 0.4014 MFSEFPSSLNRVNLQILKSCVNKLLEVILLFNIIFQIGGYEEDVDESDSIVYSEHGGKDKNSRQVFHLKLEGRNLAMERSINYGIEVRVIRGVRYEG* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4893 97 Pfam SAD/SRA domain 35 93 IPR003105 -
Mal1g4893 97 Gene3D - 7 97 IPR036987 -
Mal1g4893 97 PANTHER SRA-YDG-RELATED 36 97 - -
Mal1g4893 97 SMART G9a_1 10 97 IPR003105 -
Mal1g4893 97 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 36 97 - -
Mal1g4893 97 SUPERFAMILY PUA domain-like 38 95 IPR015947 -
Mal1g4893 97 ProSiteProfiles YDG domain profile. 1 97 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4893 Mal-Chr1 117859737 117860465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4893 34 92 Su(var)3-9 homologs AT1G73100 42.373 1.08e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4893 K11420 - gmx:100795514 104.76