Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4859 ATGAGATTCACCACACTCTCAAGTAGCTCCTCCATCATGGTGGAAACCACCCCCACCACCACTAACAACAACAACAACAACAAGTTGATAATGACAACATTAGCACTTACAAAACCCTCCTTTGGTAGGTCTATTGATCTCCCTCAAGATCTAAGGGAGGACGTTGCTTCAACGTCCTCCAAAAAAACCAAAGATAGACCCAAGGGATCTAAGAATAAACCTAAACCCAAGGGAGCTTACATCAATGCCAATGATGTTCAATCCATCATCAAGATGGCTTGGCGTCATCAAGCTCACATCACACTGTTAAGAGGTGTAGGTCTTGTCTCTGACATTTCCCTTCACGACCCGATATCAAATGCCTCTCCAATCACAATCCAAGGTTCTTTTGAAATGATATCTCTATGTGGAACTTACGTCAATCCAAATTGCGATCATGTTCCTTCCGAGTTCATCACAGACCCCGCTTTTACTTCTTTTTCCGTTCAAATATCTAGTGGTAATGGTCAAGTGTTTGGCGGGGTCGTTAGAGGGAAGCTTAAGGCTTCAAGTGTTGTTACGATTACTGCTACCCTTTTGAGGAAGCCAATTCATGATGATCCAAAAGGTTGA 612 0.4297 MRFTTLSSSSSIMVETTPTTTNNNNNNKLIMTTLALTKPSFGRSIDLPQDLREDVASTSSKKTKDRPKGSKNKPKPKGAYINANDVQSIIKMAWRHQAHITLLRGVGLVSDISLHDPISNASPITIQGSFEMISLCGTYVNPNCDHVPSEFITDPAFTSFSVQISSGNGQVFGGVVRGKLKASSVVTITATLLRKPIHDDPKG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4859 203 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 194 - -
Mal1g4859 203 MobiDBLite consensus disorder prediction 45 79 - -
Mal1g4859 203 MobiDBLite consensus disorder prediction 47 65 - -
Mal1g4859 203 MobiDBLite consensus disorder prediction 1 26 - -
Mal1g4859 203 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 86 196 IPR014476 GO:0003680
Mal1g4859 203 ProSiteProfiles PPC domain profile profile. 69 203 IPR005175 -
Mal1g4859 203 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 86 196 - -
Mal1g4859 203 Gene3D - 82 200 - -
Mal1g4859 203 CDD DUF296 86 189 IPR005175 -
Mal1g4859 203 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 191 IPR005175 -
Mal1g4859 203 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 76 - -
Mal1g4859 203 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 76 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4859 Mal-Chr1 116897343 116899993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4859 61 198 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 29.487 1.71e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4859 - - mtr:MTR_5g089600 162.925