Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4846 ATGGCTCACCATTATTCTAATAAGGCCTTAGGTTGCATTCTCTTATTTTCTCTTTTTGTTTCTTCTTTTTCATCCTTTACCGATGGCCATGGTAATTATTTCATTTTCCCTAGTGATGATGCACCAGTTGATCCAATAGTTGTCCCTAGTGATGATGGAAGAGTTGATCCAATAGTTGCCCGTGGTGATGATCAACCAGATTTTGATATTGAAAAGGGTTTTGATGATACTCCGACTCAATTTCCAGATGCTCCGGCTCTATCACCAACGCCATTATTCTCTTCTGAAAGCGATGATTCTCCCGCTCCATCACCATTATTCTCTTTTGAAAGCGAAGATTCTCCCGCTCCATCACCTGTAATCAAAACTGAAAATGGTAGTAATAATAATAATTCTGTCGCAAGTTTTCCTAATGAGAGGCTAAAGCAAGCTCATGTTGCATTTCAAGCATGGAAAGCAGCTATTTATTCTGACCCTTTTAACACAACTGGTAATTGGGTTGGTAATGATGTTTGTTCTTACACTGGTGTGTTTTGTGCTCCTGCTCTTGATGATCCTAATTTGAATGTTGTTGCCGGTGTTGATCTTAACCACGCCGACATTGCTGGTCACCTTCCAGAAGAGTTAGCCCTATTGAATGATACTGCTCTTTTCCACCTTAACTCAAACAGGTTTTGCGGTATTATTCCAGAGAGCTTTAAAAATCTCACCGGTATTCATGAGTTTGATATCAGTAACAACCATTTCGTCGGTGATTTTCCTTCTGTGGTACTCACATGGCCAAATTTGAAGTACTTGGATATTAGATTCAATGACTTTGAAGGATGTTTACCTAATGAGCTCTTTGAGAAAGAACTTGATGCAATATTTTTGAACGACAACCGTTTCACATGTGGTATACCAGAAACACTTGGAAAATCAAAAGCCACTGTTGTGACTTTTGCTAACAACCATTTCTCAGGTTGTATTCCAAAATCAATTGGGAACATGGTGAACTTGAATGAGGTTGTTTTATTGGGAAATGGTCTTGGTGGTTGTTTTCCACAAGAGATTGGTTTGTTAAGCAATGTAACTGTTTTGGATGTTAGCAATAATGGGTTTGTTGGGACACTACCAAATTTGTCAGGATTGAAGAATGTTGAGGTTATTGACATTGCACATAACAAGCTTAGTGGATATGTTTCAAACACTATTTGTCAGCTACCTTTGTTGCAGAACTTCACATTTTCTGATAATTACTTCAATGGAGAAGCTCAAACTTGTGTTCCTTCTGGTAATTCATTAGTTGCATTTGATGATGCCAATAATTGTTTACCTGGAAGGAAGAATCAAAAGACATCCAAAGAATGCTTACCAGTTTTGACCAAACCTGTGGATTGTAGCAAAAATTGTGGCGGAGGAGAAGGAAATAGTCCTGCTCCTTCAACACCAAAACCACCAGTTCTGCCCCCTGTTGAGGACATTCCACCAACACTTCCACCAGTTGAGGATATTCCACCAACGAGAGCACCGGTTGAGGACATTCCACCAACGAGAGCACCGGTCAAGGACATTCCACCAACAAGAGCACCGGTTGAGGACATTCCACCAACGAAAGCACCGGTTGAGGACATTCCACCAACAAGAGCACCGGTCGAGGACATTCCACCAACAAGAGCACCAGTGTCATCACCACCACCTCCGGTTCACTCTCCTCCACCACCAGTCCACTCTCCACCACCACCTCCGGTTCACTCTCCTCCACCACCAGTCCACTCTCCACCACCACCACCAGTTCACTCTCCTCCACCACCTGTCCACTCACCTCCACCACCTGTCCACTCACCTCCTCCACCAGTCCACTCTCCACCACCACCAGTTCATTCTCCCCCACCACCTGTCCACTCACCTCCTCCACCAGTCCACTCCCCACCACCACCGGTGTACTCCCCTCCACCACCACCACCAGCTCACTCTCCACCCCCACCAGTCTATTCTCCACCACCACCAGTTCACTCTCCACCACCCCCACCAGTCCATTCTCCACCACCACCGGTGCACTCCCCTCCACCACCAGTCCACTCACCACCACCACCAGTACACTCTCCTCCTCCACCGGTCAACTCTCCACCACCACCAACATGGGATGAAATCACCTTGCCACCACACATTGGAGCTGAATATAGGTCACCTCCTCCCCCAGCTATTGAAGGATACTAA 2199 0.452 MAHHYSNKALGCILLFSLFVSSFSSFTDGHGNYFIFPSDDAPVDPIVVPSDDGRVDPIVARGDDQPDFDIEKGFDDTPTQFPDAPALSPTPLFSSESDDSPAPSPLFSFESEDSPAPSPVIKTENGSNNNNSVASFPNERLKQAHVAFQAWKAAIYSDPFNTTGNWVGNDVCSYTGVFCAPALDDPNLNVVAGVDLNHADIAGHLPEELALLNDTALFHLNSNRFCGIIPESFKNLTGIHEFDISNNHFVGDFPSVVLTWPNLKYLDIRFNDFEGCLPNELFEKELDAIFLNDNRFTCGIPETLGKSKATVVTFANNHFSGCIPKSIGNMVNLNEVVLLGNGLGGCFPQEIGLLSNVTVLDVSNNGFVGTLPNLSGLKNVEVIDIAHNKLSGYVSNTICQLPLLQNFTFSDNYFNGEAQTCVPSGNSLVAFDDANNCLPGRKNQKTSKECLPVLTKPVDCSKNCGGGEGNSPAPSTPKPPVLPPVEDIPPTLPPVEDIPPTRAPVEDIPPTRAPVKDIPPTRAPVEDIPPTKAPVEDIPPTRAPVEDIPPTRAPVSSPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPPAHSPPPPVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVNSPPPPTWDEITLPPHIGAEYRSPPPPAIEGY* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4846 732 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 622 727 - -
Mal1g4846 732 Gene3D Ribonuclease Inhibitor 143 438 IPR032675 -
Mal1g4846 732 PRINTS Proline rich extensin signature 561 577 - -
Mal1g4846 732 PRINTS Proline rich extensin signature 540 561 - -
Mal1g4846 732 PRINTS Proline rich extensin signature 507 519 - -
Mal1g4846 732 PRINTS Proline rich extensin signature 579 596 - -
Mal1g4846 732 PRINTS Proline rich extensin signature 471 483 - -
Mal1g4846 732 Pfam Leucine Rich Repeat 262 283 IPR001611 GO:0005515
Mal1g4846 732 MobiDBLite consensus disorder prediction 462 732 - -
Mal1g4846 732 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 622 727 - -
Mal1g4846 732 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 115 646 - -
Mal1g4846 732 SUPERFAMILY L domain-like 148 438 - -
Mal1g4846 732 MobiDBLite consensus disorder prediction 473 711 - -
Mal1g4846 732 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 115 646 - -
Mal1g4846 732 MobiDBLite consensus disorder prediction 51 129 - -
Mal1g4846 732 MobiDBLite consensus disorder prediction 90 104 - -
Mal1g4846 732 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4846 Mal-Chr1 116721241 116723439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4846 135 463 Trihelix Transcription Factor Family AT3G19020 67.273 1.68e-163 494