Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4798 ATGGAAAAAGTAGCTCCTCCTCTTCTTCCTCTTCATCCTCCTATGTTATCACATCAATTTTATGATTCATCATCAAATACCAAAAAACGCGATCTATTATCATCATCATACGACGTCGTTCATATACCAAACGATAATTGGAACCCTAAAGAATGGAATTGGGACAGCATCCGCTTCACAGCGAAATCTTCGTCAACAACAGTCGTACAACAACAGGCCGAAGAATCTCTGAAACTAAATCTCAGCACCGGCGGAGACGGTTGTCAAAGCGGCGGAATTATCAGAGCAAACAAACGAGTCCGTTCAGGATCTCCAACTTCTGCATCGTATCCGATGTGTCAAGTTGATAACTGTAAAGAAGATCTATCAAAAGCGAAGGATTATCATCGAAGACATAAGGTGTGTGAAGCTCATAGCAAAGCTTCGAAAGCTTTGCTTGGGAATCAAATGCAACGGTTTTGTCAACAGTGTAGTAGGTTTCATCCGTTGGTGGAGTTTGATGAAGGGAAACGGAGTTGTAGACGGAGACTTGCTGGACATAATCGGCGCCGGAGGAAAACGCAGCCGGATGAGGTTGCGGCGGCGAATTCACCGCCGTTGAATCAGGTTGTGGCTGCTGCTGCTAATTTGGAAATTTTTAATTTGTTGACTGCTATTGCTGATGGTTCTCAAGGAAAATTTGAGGAAAGAAGGTCACAAGTTCCAGATAAAGAACAGCTTGTACAAATTCTGAATAGGATCCCTTTACCTGCCGATCTTACAGCAAAGTTGCTGGATGTTGGTAATAATTTGAATGGGAAAAATGATAATGTGCAAATGCAAACTTCACCCTCCTATAATCATCGCGATGATCAACGGACCAATGTTCCCCCTGCTCAGTTAACTAAGGACTTTCTTGCCGTTCTTTCCACCACTCCATCCACACCTGCTCAAAATGGCGGCAACGGGTCCACGGTTAGTGCTGATCGGATGAGAGAACAACATTTCACTTCAGTTGGTGGAGAAAGAAGCAGCGGCAGTTCTCAGTCTCCAAATGATGATTCAGATTACCAAGAGGATGTACGAGTTAATTTGCCATTGCAACTTTTTGGCTCCTCGCCAGAAGATGACAGCCCGTCTAAATTGCCATCTTCACGAAAGTATTTTTCATCGGAAAGTAGTAATCCTGTGGACGAAAGGTCGCCGTCGTCATCTCCTCCTGTTGTGGAGATGAATTTTGGTTTGCAAGGTGGGATTAGAGGTGTCAATTCTAATGGTATTTCGACAGGAATGGGAGTCAATGCAAATAAGGAAACTAGCCAAAGTCATAGTTGTACTACTATGCCTCTTGATCTCTTTAAAGGGTCAAAATCAAATAACATGATCCAACAATCTAGTTCAGTTCAAAGTGTTCCATTTAAAGCTGGTTATGCATCTTCAGGCTCTGATTATTCACCTCCCAGTTTGAATTCAGATACTCAGGATCGTACTGGGAGAATAATGTTTAAATTATTTGACAAGCATCCTAGCCATTTCCCAGGAACATTGCGGTCACAGATTTACAATTGGCTTTCTACCCGACCATCAGACTTGGAGAGTTACATTAGACCCGGCTGTGTTGTCCTATCAATTTATACTTCGATGTCTTCTGCTGCCTGGGCGCAACTAGAAGAAAACTTACTCCAACGTGTTCATTCTTTAATTCATAACTCAGATTCTGATTTCTGGAGAAGTGGAAGATTTCTTGTTTATTCTGGCAGTCAGTTAGCATCACACAAAGATGGAAATATGCGTATGTGCAAACCATGGGGAACATGGAGGTCTCCAGAGTTGATATCAGTTTCTCCTTTGGCGATTGTTGGTGGTGAAGAAACCTCTATGTCATTGAAGGGAAGAAACCTGTCTGCTCCTGGCACAAAGATTCATTGCATTGGTGCTGACGGTTACACATCATCAGAAGTTAAAGGATCTGGAGATCCTGGTATGATCTATGATGAAATAAAGTTAGGTGGTTTTAAAGTTCAGAATACATCTCCTGGTGGTGCTCTAGGTCGCTGTTTCATTGAGGTTGAGAATGGTTTCAAGGGCAACAGTTTCCCAGTGATAATAGCAAATGCATCCATTTGCAAGGAATTGAGACCGCTTGAGTCTGAATTTAACGAGGAGGAAAAAATGTGTGATGCCATTTCAGAGGAGCATGAATATCATTTCGGGAGGCCCAAGTCAAGGGATGAGGCTTTACACTTTTTGAATGAGCTTGGCTGGCTGTTTCAAAGGGAAAGGTTCTCGAATGTGCACGAAGTTCCAGATTATTCGCTCGACAGGTTCAAATTTGTACTGACGTTTTCTGTGGAAAGAAACTGTTGTATGTTAGTCAAAACCCTTCTGGATATACTGGTTGATAAACACTTTGAAGGAGAAAGTTTGTCGACAGGGTCAATGGAGATGCTGAAAGCAATCCAACTCCTAAATAGAGCAGTGAAAAGAAAGTACACAAGCATGGTTGATTTGCTCATCAACTATTCTATAACTAACAAAAATGATATGTCCAAGAAATATGTATTTCCACCAAATCTTGAGGGCCCTGGTGGTATCACTCCCTTGCATTTGGCAGCATCTACATCGGATTCTGAAGGTGTAATTAACTTGTTAACAAATGATCCACAGGAGATTGGGTTGAAGTGCTGGGAGACCCTTGCGGATGAAAACGGGCAGACTCCACATGCCTATGCCATGATGAGAAATAATCACTCTTACAATATGCTGGTTGCCCGTAAACGTTCTGATAGACAAAGAAGTGAAGTGTTGGTTAGAATTGACAATGAGATAAAGCACCCCTCACTGGGAATTGAGCTACTGCAAAAGCGAATTAACCAAGTCAAACGAGTTGGGGACTCCTGTTCCAAGTGTGCAATTGCAGAAGTTCGCTCCAAAAGAAAATTTTCCGGTTCACGGAGCTGGCTTCACGGTCCCTTCATTCATTCAATGCTAGCTGTTGCTGCTGTTTGTGTATGTGTTTGTGTGTTATTCCGCGGAACCCCTTTTGTAGGCTCAGTTTCTCCCTTCAGGTGGGAAAACTTGCATTATGGCACAATGTAA 3078 0.4259 MEKVAPPLLPLHPPMLSHQFYDSSSNTKKRDLLSSSYDVVHIPNDNWNPKEWNWDSIRFTAKSSSTTVVQQQAEESLKLNLSTGGDGCQSGGIIRANKRVRSGSPTSASYPMCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLVEFDEGKRSCRRRLAGHNRRRRKTQPDEVAAANSPPLNQVVAAAANLEIFNLLTAIADGSQGKFEERRSQVPDKEQLVQILNRIPLPADLTAKLLDVGNNLNGKNDNVQMQTSPSYNHRDDQRTNVPPAQLTKDFLAVLSTTPSTPAQNGGNGSTVSADRMREQHFTSVGGERSSGSSQSPNDDSDYQEDVRVNLPLQLFGSSPEDDSPSKLPSSRKYFSSESSNPVDERSPSSSPPVVEMNFGLQGGIRGVNSNGISTGMGVNANKETSQSHSCTTMPLDLFKGSKSNNMIQQSSSVQSVPFKAGYASSGSDYSPPSLNSDTQDRTGRIMFKLFDKHPSHFPGTLRSQIYNWLSTRPSDLESYIRPGCVVLSIYTSMSSAAWAQLEENLLQRVHSLIHNSDSDFWRSGRFLVYSGSQLASHKDGNMRMCKPWGTWRSPELISVSPLAIVGGEETSMSLKGRNLSAPGTKIHCIGADGYTSSEVKGSGDPGMIYDEIKLGGFKVQNTSPGGALGRCFIEVENGFKGNSFPVIIANASICKELRPLESEFNEEEKMCDAISEEHEYHFGRPKSRDEALHFLNELGWLFQRERFSNVHEVPDYSLDRFKFVLTFSVERNCCMLVKTLLDILVDKHFEGESLSTGSMEMLKAIQLLNRAVKRKYTSMVDLLINYSITNKNDMSKKYVFPPNLEGPGGITPLHLAASTSDSEGVINLLTNDPQEIGLKCWETLADENGQTPHAYAMMRNNHSYNMLVARKRSDRQRSEVLVRIDNEIKHPSLGIELLQKRINQVKRVGDSCSKCAIAEVRSKRKFSGSRSWLHGPFIHSMLAVAAVCVCVCVLFRGTPFVGSVSPFRWENLHYGTM* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4798 1025 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14 40 1025 - -
Mal1g4798 1025 ProSiteProfiles Ankyrin repeat region circular profile. 856 877 - -
Mal1g4798 1025 SUPERFAMILY Ankyrin repeat 812 910 IPR036770 -
Mal1g4798 1025 MobiDBLite consensus disorder prediction 329 350 - -
Mal1g4798 1025 MobiDBLite consensus disorder prediction 264 289 - -
Mal1g4798 1025 SUPERFAMILY SBT domain 111 191 IPR036893 GO:0003677|GO:0005634
Mal1g4798 1025 MobiDBLite consensus disorder prediction 362 405 - -
Mal1g4798 1025 Gene3D - 103 174 IPR036893 GO:0003677|GO:0005634
Mal1g4798 1025 MobiDBLite consensus disorder prediction 329 347 - -
Mal1g4798 1025 ProSiteProfiles Ankyrin repeat profile. 856 877 IPR002110 GO:0005515
Mal1g4798 1025 Pfam SBP domain 113 186 IPR004333 GO:0003677
Mal1g4798 1025 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 40 1025 IPR044817 GO:0003677
Mal1g4798 1025 MobiDBLite consensus disorder prediction 364 403 - -
Mal1g4798 1025 Gene3D - 777 937 IPR036770 -
Mal1g4798 1025 ProSiteProfiles Zinc finger SBP-type profile. 110 187 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4798 Mal-Chr1 115575504 115580869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4798 14 1025 SBP-box Gene Family AT1G20980 51.128 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mal1g4798 SBP 2.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4798 - - gmx:100819004 1383.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4798 1 115575504 115580869 Mal1g4798 1 115575504 115580869 ECH