Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4793 ATGAGTAGTTGTGGAAGAGAAGGTGTAGTGAGACAATATGTAAGATCAAAGGTTCCTCGTTTAAGATGGACACCTGAACTTCATCGTTGCTTTGTTTATGCCATTGAAACTCTTGGTGGTCATCAAAAGGCTACTCCTAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGCTAACAATTTCACATGTCAAAAGCCATTTGCAGATGTATAGGAGTATGAGAGGTGACTCATGTAAACAAGATAGGACTACTTCCGTACATAAAAAACAATCTTTTCAGGAGCATGATGATGGGTTTGGAGATGAATCTCTTGGAATGGAATCTGATTCTCTCTTTAGCTACAGAAATTTCTCCCCAAAAAGAGCTAGAATCGAGAAGACAAATTCCCTCTCAGGAATATGTGAAGCAGTTCCAAATCCATACACAACTTTTTATGATTATGTGCAGGACATGGTTCAGCAACATCAGAAGGGAATAAAGGAGATTTGTTGTGTTGGTTCAATATGGCATACTCCTCAACCACAATATTGCACAATCTTTCCTGTGCTACCAAAACAAGAAACTGATTTGCTCCAGGTTATCAAGTTAAATGAAAAAAAGCATGTGAATGAAATTGGCAAGACTAAGAGTGTACATGCAGCAGAAGAAGAAGATATAAGGGGTTGTGAGTTGTCATTATCAATTTCATTGCCCCATCTTTGCCCTCAGAGAAGTAATGCTTCTTCAACCAATGATATGAGAGACTCTGGATTTAGCAACTATATGAGTTGTTCCAATGTCCAAAACAGAATTAATTTGGACCTATCTTTGGCCATTTAA 819 0.3797 MSSCGREGVVRQYVRSKVPRLRWTPELHRCFVYAIETLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDSCKQDRTTSVHKKQSFQEHDDGFGDESLGMESDSLFSYRNFSPKRARIEKTNSLSGICEAVPNPYTTFYDYVQDMVQQHQKGIKEICCVGSIWHTPQPQYCTIFPVLPKQETDLLQVIKLNEKKHVNEIGKTKSVHAAEEEDIRGCELSLSISLPHLCPQRSNASSTNDMRDSGFSNYMSCSNVQNRINLDLSLAI* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4793 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Mal1g4793 272 Gene3D - 18 74 - -
Mal1g4793 272 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 272 - -
Mal1g4793 272 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Mal1g4793 272 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Mal1g4793 272 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 272 IPR044848 GO:0003700
Mal1g4793 272 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4793 Mal-Chr1 115467081 115472035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4793 1 74 G2-like Transcription Factor Family AT1G14600 72.152 7.45e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal1g4793 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4793 - - gmx:100810994 349.747