Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4791 ATGGCAGCACCATTTTCATCTTTCTTTACAATCACAGAAGAGGATCAGAATCAGATGAATCAACAAAATTCATCAACACCATCTTCATCAACAACTCCAACTGCACCACCACCTCAAAAGAAAAGGAGAAACCAACCTGGAACACCAAATCCAGATGCAGAAGTGATAGCACTATCTCCCAAGAGCCTAATGACAACAAACAGGTATGTATGTGAAGTGTGTCAAAAAGGGTTCCAAAGGGAGCAAAATTTGCAACTACATAGAAGAGGACACAATTTGCCTTGGAAGCTAAAGCAAAAGAGTAACAAAGAGCCAAAGAGAAAGGTTTATTTGTGTCCAGAGCCAACATGTGTTCACCATGACCCTTCAAGAGCTCTTGGTGACCTCACTGGAATTAAGAAACACTATTTTAGAAAACATGGTGAGAAAAAATGGAAGTGTGAAAAGTGTTCTAAGAAATATGCTGTTCAATCTGATTGGAAAGCTCATTCTAAGACTTGTGGTACTAAGGAGTATAGATGTGATTGTGGCACTCTCTTTTCCAGAAGAGACAGTTTCATCACACACAGAGCCTTCTGTGATGCACTTGCTCATGAAAATTCAAGACAACCACAATTACCAAACCTAATCACCAATACTTCCATTAACAACTCCCAAATATTTGGAAACAATCGTAACAACATGTCCTTAGCCTTATCTCAAATTCCTCCACATCACATCTCTTCCATCCATGACCAAAACGACAACAACCAATCCACTGAAATCTTGCGTTTTGGTAACACAAGAATTTCACAATTTAACAACATTCTATCCCCACCCCCACAACAAACTCTTCACACCCCTCCATTTAATTTCATCACACAACAAAATCAAAGTTACCATGATGATCACCAATCTCAACCATTCCAAGGACTAATACCATTGTCCGAACTCAACAACAATAACAACATGTTTTCTGAAAATTTCAACAATGAAGGATCAAATAATTTCTTTGCTGAAAATTCTATAATGTTTGATCATAATAACCAAACAAATACTATACCTCCTCACATGTCAGCAACAGCTTTGCTTCAAAAAGCTACTCAAATGGGTGCAACATCAAGCACCACTACCACCACCATCAATGCTTCTTCTTCTTCTTCTTGTTCTACTTCTGTAGCAACAAAGGTTAATGGTGGTTATGATGGACTCACTAGAGATTTTCTTGGAGTTGGTCAAATAGTTATGAGAAACATGAATGGAGGAGGAGGAATTGGTCAAAGAGGTCAACGTAACTTCAACTTGGAAGCAGAAAATAATAATGGAAATATTGGTGGAGGGAAATTTGAGTGA 1332 0.3814 MAAPFSSFFTITEEDQNQMNQQNSSTPSSSTTPTAPPPQKKRRNQPGTPNPDAEVIALSPKSLMTTNRYVCEVCQKGFQREQNLQLHRRGHNLPWKLKQKSNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYFRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCDALAHENSRQPQLPNLITNTSINNSQIFGNNRNNMSLALSQIPPHHISSIHDQNDNNQSTEILRFGNTRISQFNNILSPPPQQTLHTPPFNFITQQNQSYHDDHQSQPFQGLIPLSELNNNNNMFSENFNNEGSNNFFAENSIMFDHNNQTNTIPPHMSATALLQKATQMGATSSTTTTTINASSSSSCSTSVATKVNGGYDGLTRDFLGVGQIVMRNMNGGGGIGQRGQRNFNLEAENNNGNIGGGKFE* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4791 443 Gene3D Classic Zinc Finger 123 202 - -
Mal1g4791 443 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 2 384 - -
Mal1g4791 443 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Mal1g4791 443 SUPERFAMILY beta-beta-alpha zinc fingers 68 165 IPR036236 -
Mal1g4791 443 MobiDBLite consensus disorder prediction 1 53 - -
Mal1g4791 443 Pfam Zinc finger, C2H2 type 69 91 IPR013087 -
Mal1g4791 443 MobiDBLite consensus disorder prediction 9 30 - -
Mal1g4791 443 Gene3D Classic Zinc Finger 49 117 - -
Mal1g4791 443 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 91 IPR013087 -
Mal1g4791 443 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 2 384 - -
Mal1g4791 443 SMART c2h2final6 145 165 IPR013087 -
Mal1g4791 443 SMART c2h2final6 69 91 IPR013087 -
Mal1g4791 443 SMART c2h2final6 110 140 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4791 Mal-Chr1 115424813 115428700 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4791 39 204 IDZ Gene Family AT2G02070 89.157 5.84e-112 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g4791 zf-C2H2 0.0028 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4791 K25870 - gmx:100818072 433.721