Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4787 ATGGGGAGGATCAAACCTCAAGTTCTGCTACAACAAAGCAAAAGGAAGAAGGGCCCTTATCACATGAATCCAATAAATATTGTATTTTGCACATTGACTCTTGTCATATTTGTGTTTTTCCTCTTTGCTACATTCAGATATTGGTCCATCAATAGGACAAGATTTCAACCAGAGAAACACACATCAGTCTTTGAGGATGAAAATCATTCTGTGGAATCCAAGAAATCAGATCTACCTGGATATGCCGTTTTAAGAACCTCTAAAGGTTCTATAATAATAGAACTTTACAAGGAAAGTGTTCCTGAAGTTGTTGATGAATTCATTGACTTATGTCAAAAAGGACACTTCAAAGGGATACTTTTTCACCAAGTAATTAAGCACTATGTGATTCAAGCAAGTCGTAACAAAGGGTCGGGATCTACTGAAGATTGGAACCAGAGAGGGAGGAAATATACAAGTATGAAACACGAAGCGTTCATGCTTGGAACATCCAAGGACAAATACTTCAACAAAAGATTTGATCTTTTCATCACAACTGCACCAATACCAGATCTAAATGAGAAACTTATTGTTTTTGGCCGAGTCGTAAAGGGAGAGGACGTAGTTCAGGAAATTGAAGAAGTGGATACAGATGAACATTACCAACCAAAAATTTCTATTGGGATAATTGATGTAGATCTTAGACAAATGATGTGA 696 0.3664 MGRIKPQVLLQQSKRKKGPYHMNPINIVFCTLTLVIFVFFLFATFRYWSINRTRFQPEKHTSVFEDENHSVESKKSDLPGYAVLRTSKGSIIIELYKESVPEVVDEFIDLCQKGHFKGILFHQVIKHYVIQASRNKGSGSTEDWNQRGRKYTSMKHEAFMLGTSKDKYFNKRFDLFITTAPIPDLNEKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKISIGIIDVDLRQMM* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4787 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 231 - -
Mal1g4787 231 CDD cyclophilin 83 224 - -
Mal1g4787 231 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 89 227 IPR002130 GO:0000413|GO:0003755
Mal1g4787 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 231 - -
Mal1g4787 231 Gene3D - 64 230 IPR029000 -
Mal1g4787 231 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 83 225 IPR002130 GO:0000413|GO:0003755
Mal1g4787 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 95 110 IPR002130 GO:0000413|GO:0003755
Mal1g4787 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Mal1g4787 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 186 IPR002130 GO:0000413|GO:0003755
Mal1g4787 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 187 202 IPR002130 GO:0000413|GO:0003755
Mal1g4787 231 SUPERFAMILY Cyclophilin-like 78 227 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4787 Mal-Chr1 115224899 115227922 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4787 80 227 U-box Gene Family AT5G67530 27.778 4.32e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4787 - - gmx:100796043 362.459