Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4786 ATGGATTCAGAAAACACAAACCTAGCCTTTCCATCAGCACCACCTGGTTTCCCAATGCTTACTCCGAAGCAAGAGCCTCGGGATGATCAACCACCACAACCACAACCACAACCAAACCTAGCTGAATCACCGAGCCTCAATCTGAACCTGGGTCTTAACCTAGAGCAAACCCTAGAAACCAACAACAACGTGAACAACGAGTTTCAGAGAATGGCTGAGATTTTCAGAAGCTCGTTCACACAAGGGTTGCAACAGACACAAAATGTTGATGCTGTTGATGAAAATCAAGATGCTAGGGCAATTGTTCCGGTCCCGCAGACGCAGAATTACAATAATGCCCCTCCAGCTGGGGATGTTATGGCTCCAAGGAGGTATAAAGAGCTTGTTAGGATGACGGATCTGGGTTTACCGGATCAGCGTCAGTTTCGGGAAATTGTGAGGAGGACTAGGATGGTGTATGATTCGGTTCGTGTTTTGAATATGGCTGAAGAAGAAAGAAATTTGAATGTTAGAAGAGTGAGAAGTGATTTAAGAGCTTCTGCTACGATGAGGAGTCAGGGTTTGTGGCTGAATCGCGAGAAGAGGATTGTTGGTGCCATTCCTGGGATTTGTATTGGTGATGTGTTTTTGTATAGGATGGAGTTGTGTGTGGTTGGTTTACATGGTCAACCACAAGCTGGGATTGATTATTTGCCAGGGAGTATGAGTTCCAATGGTGAACCGATTGCTACTAGTGTGATTGTTTCTGGTGGGTACGAGGATGATGTTGATGAAGGCGAGGTTATTATTTACTCGGGGCATGGCGGGCAAGATAAGAATTCGAAGCAGGTTTGTCATCAGAAGTTGGAAGGTGGGAATCTTGCTATGGAGAGGAGTATGCATTATGGGATCGAGGTTAGGGTTATTCGAGGTGTACGGTGTGAAGGTACTTCTTCTTCCTCAGGTAAGGTTTATGTTTATGATGGTTTGTATAGGATCATTGCATGCTGGTTTGATCATGGTAAAAGTGGTTTAGGTATATATAAGTTTAAGTTATGGAGGATCGATAGTCAACCTAAGATGGGTAGTTTGGTCTTAAAGGAGGCTCATTTGCTTAGGAGAGACCCTTTGTGTTATAAGCCTATGTGTGTTATATCTCTTGATATGTCAAACGGGAAGGAGAGGGTTGGCATAAGGCTTTTTAATGATGTTGATAGATGTAACGATCCTATGTGCTTTGAATATCTTCCTAGGGCTTCTTTTCCGGAGATTGTGATTCATCATCAAAGTGTGACGACGGGGAAAGGTTGTATATGTGTGGGTGGTTGTGGGGAAGGATGCCTTTGTTTCACGAAAAATGGAAACAACTTCCCTTATAGCCAAAGCGGGCTTCTCTTGAAAGGAAAGCCGGTAATTTTTGAATGCGGTCCTTTTTGTAGCTGTCCGCCTCATTGTCGGAACCGTGTTACCCAAAAAGGGCTCAAACATAGGTTGGAAGTGTTCAGATCCAAGGAGACTGGTTGGGGAGTTAGGTCTTTAGACCTTATTCAAGCTGGCTCATTCATTTGCGAGTACACTGGGGTTTTTCTGCCAAGAGAGGCATCACAAGTTGTGGCCATGAGTGGTGATTTCTTAATATATCCGAATCGGTTTTCGGATAGGTGGACGGAATGGGGTAATTTATCCCTAATAGAAGATAGTTATGCGCCTCCGTCGTATCCAACGATTCCTCCTTTGGATTTTGCCATTGATGTGTCTACAATGAGGAATGTGGCTTGCTATATAAGTCACAGCTCAACTCCCAATGTGATCGTTCAATTTGTTTTGTATGATCACAGTAGTTTGATGTACCCTCACGTTATGCTGTTTGCGATGGAGAACATCCCTCCATTGAGAGAGTTCAGCCTGGACTATGGAGTAGCTGATGATGAGTTAACTGGCAAGCTCGCAATACGCAATTGA 1941 0.4405 MDSENTNLAFPSAPPGFPMLTPKQEPRDDQPPQPQPQPNLAESPSLNLNLGLNLEQTLETNNNVNNEFQRMAEIFRSSFTQGLQQTQNVDAVDENQDARAIVPVPQTQNYNNAPPAGDVMAPRRYKELVRMTDLGLPDQRQFREIVRRTRMVYDSVRVLNMAEEERNLNVRRVRSDLRASATMRSQGLWLNREKRIVGAIPGICIGDVFLYRMELCVVGLHGQPQAGIDYLPGSMSSNGEPIATSVIVSGGYEDDVDEGEVIIYSGHGGQDKNSKQVCHQKLEGGNLAMERSMHYGIEVRVIRGVRCEGTSSSSGKVYVYDGLYRIIACWFDHGKSGLGIYKFKLWRIDSQPKMGSLVLKEAHLLRRDPLCYKPMCVISLDMSNGKERVGIRLFNDVDRCNDPMCFEYLPRASFPEIVIHHQSVTTGKGCICVGGCGEGCLCFTKNGNNFPYSQSGLLLKGKPVIFECGPFCSCPPHCRNRVTQKGLKHRLEVFRSKETGWGVRSLDLIQAGSFICEYTGVFLPREASQVVAMSGDFLIYPNRFSDRWTEWGNLSLIEDSYAPPSYPTIPPLDFAIDVSTMRNVACYISHSSTPNVIVQFVLYDHSSLMYPHVMLFAMENIPPLREFSLDYGVADDELTGKLAIRN* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4786 646 ProSiteProfiles YDG domain profile. 198 347 IPR003105 -
Mal1g4786 646 SMART set_7 489 638 IPR001214 GO:0005515
Mal1g4786 646 Pfam SET domain 500 632 IPR001214 GO:0005515
Mal1g4786 646 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 46 645 IPR025794 GO:0016571
Mal1g4786 646 ProSiteProfiles Pre-SET domain profile. 428 486 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g4786 646 Pfam SAD/SRA domain 197 351 IPR003105 -
Mal1g4786 646 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 21 642 - -
Mal1g4786 646 Gene3D SET domain 360 641 IPR046341 -
Mal1g4786 646 MobiDBLite consensus disorder prediction 1 45 - -
Mal1g4786 646 SMART G9a_1 193 351 IPR003105 -
Mal1g4786 646 MobiDBLite consensus disorder prediction 15 39 - -
Mal1g4786 646 Gene3D - 179 359 IPR036987 -
Mal1g4786 646 SUPERFAMILY SET domain 371 633 IPR046341 -
Mal1g4786 646 SMART preset_2 379 473 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g4786 646 ProSiteProfiles SET domain profile. 489 632 IPR001214 GO:0005515
Mal1g4786 646 Pfam Pre-SET motif 382 481 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g4786 646 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 21 642 - -
Mal1g4786 646 SUPERFAMILY PUA domain-like 179 363 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4786 Mal-Chr1 115181635 115183575 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4786 143 634 Su(var)3-9 homologs AT5G04940 37.876 7.30e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal1g4786 SAD_SRA 5e-46 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4786 K11420 - gmx:100795514 826.624