Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4784 ATGGATTCACAGAACACAAATCAAACCTTTCCATCAGCACCACCAGGGATACCTATCCCAATGCTTACTCCGAAGCTAGAGGTTCGGGATGATGAACCACCACCACCACCACAACAACAACAACCAAACCTAGGTGACATACCAAACCTTAATCTTAACCTAGGTCTTAACCTAGAACAAACCCTAGCAGCCACTAACAACATCGAGTTTCAGAGAATGGCTGAGATTTTCAGAAGCTCTTTCAGAAAAGGGTTGCAACAGAATCAAAATGATGATGCTGTTGAGGAGAATTCAGATTCAAGGGCTATTGTTCCAGTTCCGAATGCGCATACGCAGAATTACAATAATGCCCCTCCTGCTGGGGAGGTTATGGCTCCAAGGAGGTATAAAGAGCTTGTTAGAATGACGGATCTGGGATTACCGGATCAGCGTCAGTTTCGGGAAATTGTGAGGAGGACTAGGATGGTGTATGATTCGGTTCGTGTTTTGAATATGGCTGAAGAAGAAAGAAATTTGAATGTTAGAAGAGTGAGAAGTGATTTAAGAGCTTCTGCTACCATGAGGAGTCGGGGTTTGTGGCTGAATCGCGAGAAGAGGGTTGTTGGTGCCATTCCTGGGATTTGTATTGGTGATGTGTTTTTGTATAGGATGGAGTTGTGTGTGGTTGGTTTACATGGTCAACCACAAGCTGGGATTGATTATTTGCCGGGGAGTATGAGTTCGAATGGTGAACCGATTGCTACTAGTGTGATTGTTTCTGGTGGTTATGAGGATGATGTTGATGAAGGTGAGGCTATTATTTACTCGGGGCATGGTGGTCAGGATAAGAATTCGAAGCAGGTTTGTCATCAGAAGTTGGAAGGTGGGAATCTTGCTATGGAGAGGAGTATGCATTATGGGATTGAGGTTAGGGTTATCCGCGGTGTAAGGTGTGAAGGTACTTCTTCTACTTCGGGTAAGGTTTATGTTTATGATGGTTTGTATAGGATCATTGAATGCTGGTTTGATCATGGTAAAAGCGGTTTTGGTATTTATAAGTTTAAGTTATGGAGGATCGATGGTCAACCTAAGATGGGTAGTTTGGTCTTAAAGGAGGCTCATTTGCTTAGGAGAGACCCTTTGTGTTATAAGCCTATGTGTGTTATATCTCTGGATATGTCAAACGGGAAGGAGAGGGTTGGCATAAGGCTTTTCAATGATATTGACAGATGTAATGACCCGATGTGTTTCGAATATCTTCCTAGGGCTTCTTTTCCGCGGATTGTGATTGATCATCAAAGTGTGACGACGGGGACAGGTTGTAAATGTGTGGGTGGTTGTGGGGAAGGATGCTTTTGTTGCATCAAAAATGGAAACAACTTCCCTTATAGCCAAAGCGGGCTTCTCTTGAAAGGAAAGCCGTTAATTTTTGAATGCGGTCCTTTTTGTAGTTGTCCGCCTCATTGTCGGAACCGTGTCACTCAAAATGGGCTCAAACATAGGTTGGAAGTGTTTAGATCTAAGGAGACTGGTTGGGGAGTTAGGTCTTTAGATCTTATTCAAGCTGGCACTTTTATATGTGAGTACACTGGGGTTTTTCTGACAAGGGAGACATCACAAGTTGTGGCCATGAGTGGTGATTCCTTAATATATCCGAATCGGTTTTCGGATAGGTGGATGGAATGGGGTAATTTATCTCTGATAGAAGATAGTTATGCGCCTCCGTCGTACCCATCGATTCCTCCTTTGGATTTTGCCATGGATGTGTCTACAATGAGGAATGTGGCTTGCTATATAAGTCACAGCTCAACTCCTAATGTGATGGTTCAATTTGTGTTGTATGATCACAATAGTTTGATGTATCCTCACGTTATGCTGTTTGCGATGGAGAACATCCCTCCATTGAGAGAGTTCAGCCTGGACTATGGAGTAGCTGATGATGAGTTGACTGGCAAGCTCACAATATGCAACTGA 1953 0.4337 MDSQNTNQTFPSAPPGIPIPMLTPKLEVRDDEPPPPPQQQQPNLGDIPNLNLNLGLNLEQTLAATNNIEFQRMAEIFRSSFRKGLQQNQNDDAVEENSDSRAIVPVPNAHTQNYNNAPPAGEVMAPRRYKELVRMTDLGLPDQRQFREIVRRTRMVYDSVRVLNMAEEERNLNVRRVRSDLRASATMRSRGLWLNREKRVVGAIPGICIGDVFLYRMELCVVGLHGQPQAGIDYLPGSMSSNGEPIATSVIVSGGYEDDVDEGEAIIYSGHGGQDKNSKQVCHQKLEGGNLAMERSMHYGIEVRVIRGVRCEGTSSTSGKVYVYDGLYRIIECWFDHGKSGFGIYKFKLWRIDGQPKMGSLVLKEAHLLRRDPLCYKPMCVISLDMSNGKERVGIRLFNDIDRCNDPMCFEYLPRASFPRIVIDHQSVTTGTGCKCVGGCGEGCFCCIKNGNNFPYSQSGLLLKGKPLIFECGPFCSCPPHCRNRVTQNGLKHRLEVFRSKETGWGVRSLDLIQAGTFICEYTGVFLTRETSQVVAMSGDSLIYPNRFSDRWMEWGNLSLIEDSYAPPSYPSIPPLDFAMDVSTMRNVACYISHSSTPNVMVQFVLYDHNSLMYPHVMLFAMENIPPLREFSLDYGVADDELTGKLTICN* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4784 650 ProSiteProfiles YDG domain profile. 202 351 IPR003105 -
Mal1g4784 650 Gene3D SET domain 364 649 IPR046341 -
Mal1g4784 650 Pfam SAD/SRA domain 201 355 IPR003105 -
Mal1g4784 650 ProSiteProfiles SET domain profile. 493 636 IPR001214 GO:0005515
Mal1g4784 650 Gene3D - 183 363 IPR036987 -
Mal1g4784 650 MobiDBLite consensus disorder prediction 1 48 - -
Mal1g4784 650 SMART set_7 493 642 IPR001214 GO:0005515
Mal1g4784 650 SMART preset_2 383 477 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g4784 650 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 66 647 - -
Mal1g4784 650 Pfam SET domain 504 636 IPR001214 GO:0005515
Mal1g4784 650 Pfam Pre-SET motif 386 485 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g4784 650 SMART G9a_1 197 355 IPR003105 -
Mal1g4784 650 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 42 650 IPR025794 GO:0016571
Mal1g4784 650 SUPERFAMILY SET domain 375 637 IPR046341 -
Mal1g4784 650 ProSiteProfiles Pre-SET domain profile. 432 490 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g4784 650 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 66 647 - -
Mal1g4784 650 SUPERFAMILY PUA domain-like 183 367 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4784 Mal-Chr1 115161394 115163346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4784 147 638 Su(var)3-9 homologs AT5G04940 37.876 6.17e-102 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal1g4784 SAD_SRA 2.8e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4784 K11420 - gmx:100804592 848.966