Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4781 ATGTCTTCTCAAGAACTTGATCATCGGAGTAATGGTGTCCACTTTTTCAAGATTATTCTTCAAAGTAAACTTCAAGAAGGAAAACTGAAAGTGCCCATAAGTTTTGTGAAGATGCATTGGCAAGGAATAACAAATCCAGTTACTCTAAGACTTCCAAATACGACTGAAAAGAAAGTTTTTTGGGAGAAAACTAGTCACCATGATGTTTGGTTTTGCAATGGTTGGAAAGAATTTGCAAATGATTTGTCTTTGGGTGATTCACAACTTTTAATGTTTCAATATCAAGAAAATTCTCACTTTAATGTGATTATATTTGGTAAATGTGGACTAGAAATAAAATACCCTTTAAGAGAAACTAGTGAAGAATATGAAGAGGTTGAAAAGAGTGATAGTTCTTTGAAAATTATTGAGAATCCTTCATCACGGCGAGGTGTTGCTACTTAA 444 0.3311 MSSQELDHRSNGVHFFKIILQSKLQEGKLKVPISFVKMHWQGITNPVTLRLPNTTEKKVFWEKTSHHDVWFCNGWKEFANDLSLGDSQLLMFQYQENSHFNVIIFGKCGLEIKYPLRETSEEYEEVEKSDSSLKIIENPSSRRGVAT* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4781 147 CDD B3_DNA 14 105 IPR003340 GO:0003677
Mal1g4781 147 SMART B3_2 15 108 IPR003340 GO:0003677
Mal1g4781 147 ProSiteProfiles B3 DNA-binding domain profile. 14 108 IPR003340 GO:0003677
Mal1g4781 147 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 5 140 - -
Mal1g4781 147 Pfam B3 DNA binding domain 15 104 IPR003340 GO:0003677
Mal1g4781 147 Gene3D - 8 108 IPR015300 -
Mal1g4781 147 PANTHER B3 DOMAIN-CONTAINING 5 140 - -
Mal1g4781 147 SUPERFAMILY DNA-binding pseudobarrel domain 11 107 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4781 Mal-Chr1 115109063 115109821 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4781 15 130 B3 DNA Binding Superfamily AT1G49475 39.655 1.31e-20 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g4781 B3 1.7e-07 CL0405