Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4776 ATGTCTTCTCAAGAACTTGATCATCAGAGCAATGGTGTCCACTTTTTCAAGATTATTCTTCAAAGTAACCTTCAAGAAGGAAAACTGAGAGTGCCAATAAGTTTCGTCAAGAGGCATTGGCAAGGAATAACAAACCCTGTAACTCTAAGGCTTCCAAATATGACTCAAAAGAAAGTTTTTTGGGAGAAAACAAGTGATTATGATGTTTGTTTTTGCAATGGTTGGAAAGAATTTGCAAATTATTTGTCTTTGGGTCATTCACAACTTTTGGTGTTTCAATATCAAGGAATTTCTCTCTTTAAGGTGATTGTTTTGGGTAGATGCGGTTTAGAAATTAAATACCCTTCAAGAGAAACTAGTGAAGAATCTGAAGAGAGTGATAGTTCTTTTAAAATTATTGAGAATCCTTCATCATCACGGCGTAAAAGGCTAAAATCTCCATCACCATATGTGAAAGTTTGTAAAAAGATGAAAATCAACCCAATGGAGGAAAAAGAATCTAAGCATGAGAAGAGAATAGTCCAAACACATGCAAAATTTTACAATTTTAAGGATACGATAAATGGAAGTAGTTGTGATGATTTGATTGAGAGAAGCAAAGTTTTGTACGAGAAAGTGAAGAAACAATTCAACTATAAAAAAAACTTTTTCGCATTATTTTATGTTAAAACCAATAATCCAAAACAGGTCATACCAAATGAATTTGTCAAGACACATATGCACATGTTGAAAGAAAGAAACGCTACCCTATTTGTTGATCAAGATCATAGAACATGGAATGTTGATTTAAAGTTTACTTTAAATAATCAATTTGCACTAACTGGTGGTTGGAGTGAATTCTGTGCTCACCATAATTTGAAAATTGGTGATATTTGTGCTTTTGTGCTACACAAATGCAAAGGAACAAATTTATTTCAAGTATCTATTTTCTCTTTGGAAAAGGACATGAAAACTCCCTATTTTGAAGGGTTGGCTTGA 978 0.3282 MSSQELDHQSNGVHFFKIILQSNLQEGKLRVPISFVKRHWQGITNPVTLRLPNMTQKKVFWEKTSDYDVCFCNGWKEFANYLSLGHSQLLVFQYQGISLFKVIVLGRCGLEIKYPSRETSEESEESDSSFKIIENPSSSRRKRLKSPSPYVKVCKKMKINPMEEKESKHEKRIVQTHAKFYNFKDTINGSSCDDLIERSKVLYEKVKKQFNYKKNFFALFYVKTNNPKQVIPNEFVKTHMHMLKERNATLFVDQDHRTWNVDLKFTLNNQFALTGGWSEFCAHHNLKIGDICAFVLHKCKGTNLFQVSIFSLEKDMKTPYFEGLA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4776 325 CDD B3_DNA 14 105 IPR003340 GO:0003677
Mal1g4776 325 SMART B3_2 15 111 IPR003340 GO:0003677
Mal1g4776 325 SMART B3_2 216 313 IPR003340 GO:0003677
Mal1g4776 325 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 6 311 - -
Mal1g4776 325 PANTHER B3 DOMAIN-CONTAINING 6 311 - -
Mal1g4776 325 SUPERFAMILY DNA-binding pseudobarrel domain 9 106 IPR015300 -
Mal1g4776 325 CDD B3_DNA 230 311 IPR003340 GO:0003677
Mal1g4776 325 SUPERFAMILY DNA-binding pseudobarrel domain 212 311 IPR015300 -
Mal1g4776 325 ProSiteProfiles B3 DNA-binding domain profile. 214 313 IPR003340 GO:0003677
Mal1g4776 325 Gene3D - 7 108 IPR015300 -
Mal1g4776 325 Gene3D - 208 313 IPR015300 -
Mal1g4776 325 Pfam B3 DNA binding domain 228 306 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4776 Mal-Chr1 115045944 115048305 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4776 15 125 B3 DNA Binding Superfamily AT1G49475 36.937 1.03e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g4776 B3 1.6e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4776 - - mtr:MTR_4g119990 431.024