Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4775 ATGAGATGCAATGATGAACACGAAGCTAGAGAGAGTGATGATGATAACTTTGACGGTGAAAATATCAAACAACCCCTCAAGAAAAAGAAAATCAACTCAAATGACATTGCTACTACTGCTTCACCTCAATGGACAGACATTGACAAGAGAATAATCAATATCAATGCAACCCAACATGAAGTTTCAGGCAAGTTAATATCATACCTAAATGGTTTTCCGAAAGAATACATGAATGAGTTATTGCAACGGAAGGCAACGATTAGAAGTGTTGGTGAGGACGACGCATGGTACGTGACGTTAAACATTGGTAAAGGCAAGAGCTGTTTTTTAATGCAGGTTGGTTGGAAGTCATTTTTAAAGGAACATGATTTGAAAGTTGGTGATGTATGTAAATTTGAGATGACTCAACGCAAACCACTTTCATTCACAGTTACTATTATCCGTGCAACAAAGGAACCAAGCCCGGAGAAGTTTCAAGTAGAGCTTATAACACTCACTCTAGATATTAAGTTGTGA 516 0.376 MRCNDEHEARESDDDNFDGENIKQPLKKKKINSNDIATTASPQWTDIDKRIININATQHEVSGKLISYLNGFPKEYMNELLQRKATIRSVGEDDAWYVTLNIGKGKSCFLMQVGWKSFLKEHDLKVGDVCKFEMTQRKPLSFTVTIIRATKEPSPEKFQVELITLTLDIKL* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4775 171 Gene3D - 11 151 IPR015300 -
Mal1g4775 171 ProSiteProfiles B3 DNA-binding domain profile. 51 150 IPR003340 GO:0003677
Mal1g4775 171 SUPERFAMILY DNA-binding pseudobarrel domain 80 150 IPR015300 -
Mal1g4775 171 Pfam B3 DNA binding domain 73 149 IPR003340 GO:0003677
Mal1g4775 171 MobiDBLite consensus disorder prediction 1 21 - -
Mal1g4775 171 CDD B3_DNA 72 148 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4775 Mal-Chr1 114841860 114842872 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4775 78 149 REM Transcription Factor Family AT4G33280 32.432 1.24e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g4775 B3 3.1e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4775 - - mtr:MTR_6g061070 175.252