Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4773 ATGTCCAGTGTTCACCATGGGCGTGGAAGTGAAGCTAAGGGAATGCATTTCTACATAACTATTCAACTTCGCCAGCTGCGAGACCAAGAGCTTATGATTCCGAGGAATTTTGTAGAGAGATATTGGAAAGATGTATCAAATCCAATATCCCTTAGACTTCCAAATGGGTCTTCGTGCAAAGTTAATTGGGTACAACGCGGCGATGATATTTGGCTTCAGAATTGGAAGAGGTTTGCACGGTCGCTCAGGTGTGGAGATCTTTTTGTTTTCCAATACAAAGGAGGGTCAGATTTTCATGTCATTATATTAGATGATAGTAAATTAGAAATTGACTATTCAAGTATGACATGCAACGACGCACAAGAAAATACCAAAGAGAGTGATGATGATGATGATGATTATGAGTGTGTTGAGATTCCTAGTGACGGGGAACATGCTAAAATCCCCCTCAAGAAAAAGAGAATCAACTCAAGTGGCATTGCTACTACTGCTGCTACACCTCAATGGACAAACATTGACAAGAGAAAAACTAATATCAATGCAACCCGGCAAAAAGTTTCGGAGGCTAATAGAAATAGAGGAGGCATGTGTAAGAAAGCTCAGAAATGCTCAAAAACTAAATATGGGAATGATAGAAGTTGCTCAAATTCTCATCACAATGGGATTCCTAGTTTCACTGTCAAATTATCACCATATCATGTTGAAGGTCAAGGTCGAAGATTGAGGATACCTAATTGGTTTTCGAAAGAATACATGAATGAGTTATTGCAAGGGAAGGCAACGATTAGAAGTGTTGGTGAGGCCAGGGCAAGGGAAGTGACGTTAAACTTTGATAAAAGCAAGAGCAGTTTTGTAATGCAAGTTGGTTGGAAGCCATTTTCAAAGGAACATGACTTGAAAGTTGGCGATGAATATTCTGCATGTCCAAACTTACATGACAAATTCAAGGTTTTTGTAACATCATTAGACAAGTTGGTTGTACTATCAAGTGAGATGTTGAAGAAACATAATATATTTAATGCAAATTCAGTGGAGTTGAAAGTAGGGGAAAGAACATGGTTTGTAGAGGTGAATTATGATCTATATCTCGATTATGGTTGGTTCACTAAAGGTTGGCAAGAATTTGTGAGAGAATGCAAAGTAAAGATTGGGGATACTTGTTTGTTTGAGATGATTGATGTTCAAAATCATGTTTTCAAGGTTTCAATTATTCCAGATGTTTATCAGAACGTTTGTGTTTCATCATTTTGTAATTAG 1257 0.3763 MSSVHHGRGSEAKGMHFYITIQLRQLRDQELMIPRNFVERYWKDVSNPISLRLPNGSSCKVNWVQRGDDIWLQNWKRFARSLRCGDLFVFQYKGGSDFHVIILDDSKLEIDYSSMTCNDAQENTKESDDDDDDYECVEIPSDGEHAKIPLKKKRINSSGIATTAATPQWTNIDKRKTNINATRQKVSEANRNRGGMCKKAQKCSKTKYGNDRSCSNSHHNGIPSFTVKLSPYHVEGQGRRLRIPNWFSKEYMNELLQGKATIRSVGEARAREVTLNFDKSKSSFVMQVGWKPFSKEHDLKVGDEYSACPNLHDKFKVFVTSLDKLVVLSSEMLKKHNIFNANSVELKVGERTWFVEVNYDLYLDYGWFTKGWQEFVRECKVKIGDTCLFEMIDVQNHVFKVSIIPDVYQNVCVSSFCN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4773 418 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 328 404 - -
Mal1g4773 418 SUPERFAMILY DNA-binding pseudobarrel domain 14 104 IPR015300 -
Mal1g4773 418 CDD B3_DNA 223 303 IPR003340 GO:0003677
Mal1g4773 418 CDD B3_DNA 31 104 IPR003340 GO:0003677
Mal1g4773 418 SMART B3_2 314 407 IPR003340 GO:0003677
Mal1g4773 418 SMART B3_2 225 313 IPR003340 GO:0003677
Mal1g4773 418 SMART B3_2 19 106 IPR003340 GO:0003677
Mal1g4773 418 SUPERFAMILY DNA-binding pseudobarrel domain 319 404 IPR015300 -
Mal1g4773 418 PANTHER B3 DOMAIN-CONTAINING 9 303 - -
Mal1g4773 418 PANTHER B3 DOMAIN-CONTAINING 328 404 - -
Mal1g4773 418 CDD B3_DNA 316 405 IPR003340 GO:0003677
Mal1g4773 418 ProSiteProfiles B3 DNA-binding domain profile. 351 407 IPR003340 GO:0003677
Mal1g4773 418 Pfam B3 DNA binding domain 325 403 IPR003340 GO:0003677
Mal1g4773 418 Pfam B3 DNA binding domain 229 303 IPR003340 GO:0003677
Mal1g4773 418 Coils Coil 172 192 - -
Mal1g4773 418 ProSiteProfiles B3 DNA-binding domain profile. 226 331 IPR003340 GO:0003677
Mal1g4773 418 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 9 303 - -
Mal1g4773 418 Gene3D - 198 315 IPR015300 -
Mal1g4773 418 Gene3D - 316 406 IPR015300 -
Mal1g4773 418 Gene3D - 10 107 IPR015300 -
Mal1g4773 418 SUPERFAMILY DNA-binding pseudobarrel domain 220 304 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4773 Mal-Chr1 114774270 114777154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4773 15 303 B3 DNA Binding Superfamily AT3G18990 25.234 8.13e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g4773 B3 1.2e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4773 - - mtr:MTR_6g061070 466.463