Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4770 ATGTCATTTAATCTCCCAAAAGAGTTCTTCAAGATAGTTGTGAATGATGAACTGAAAAACCAAGAGCTTAGGCTTCCCAAGAAATATGTGGAGAATTATTGGAAAGGAATACCAAATCCAGTAATCCTTAAACTCCCAAATGGTGCTCAACAAGAAATATTTTGGGTGGAGCGTGACAATGATATTTGGTTTCAAAAGAAGTGGGATCAATTGGCAAAATTTCTGAAATATGGATATCTTTTAACTTTTAAATACATTGGTGGATCCTATTTCAAGGTTAAGATATTTGATTCCAATACATTGGAAATAGACTATTCTAATATAAAATTCGTAGATGACAATGCCACTAAGAATTTAGATGCTCAAATTAATATTGCTAGTACATCTCAAAGGAGAAAAAGTGGCAAGAGAAAATTCTCAGGTAGTAACAAAGGAGGCATGATTAAGGAGGCTAAAAAATACCCAACAATTAATGGGAATCCAAGTTTTAAACTTAAAATGTCACCATCTTACGCCCAAGGCAATGTGTTGAGGATACCAAGTGAGTTTTCAAGAGAATATTTGAACAAGTTTGAAGGGACTGCAAGTATTAGAGTTGGTGACAACATGGCTATGAAAGTGAAGGTGAATTATAGTGGAACTTGTATTATGACCAAAGGTTGGAAGTTATTTACCAAAAAAAATAACTTGCAAATTGGTGCTATATATAAATTTGAGATGACTCAGCTCCAACCACCTTCATTCACTATTACTATTGCCAAAGGTTACGAAGGAATGATATCTTCTGATGATGATAGTATTGGGAAGAGAAGAGGCATTAAAGGAGCTTCTAGGAGCTGCCATGTTCTCTCGAATTTAGAAGATTGTAGTGAGATGAAACCGAACACATTTAAGATTCAAGTGAACTCTTCCTACCCGTATATTGAAAATGAGTTTTTTAAGAGACATAGAGAGTATCATGGAAAATTGGTGGAGTTGAAAAAAGGGGGAAAATCCTGGTTTGTAAAAGTGCAATATTATGAGAGAAGTTGTAGGTTTTATGCAGGTTGGAGAAAATTTAAGAAAGATTGCGAATTGAAGATTGGTGATATTTGTCTTCTTGAGTTGATTGATGAAGAAAAGTTAGTGTTTGAAGTTTCAATTGAAAGAGTGCACCACCACTAG 1164 0.3445 MSFNLPKEFFKIVVNDELKNQELRLPKKYVENYWKGIPNPVILKLPNGAQQEIFWVERDNDIWFQKKWDQLAKFLKYGYLLTFKYIGGSYFKVKIFDSNTLEIDYSNIKFVDDNATKNLDAQINIASTSQRRKSGKRKFSGSNKGGMIKEAKKYPTINGNPSFKLKMSPSYAQGNVLRIPSEFSREYLNKFEGTASIRVGDNMAMKVKVNYSGTCIMTKGWKLFTKKNNLQIGAIYKFEMTQLQPPSFTITIAKGYEGMISSDDDSIGKRRGIKGASRSCHVLSNLEDCSEMKPNTFKIQVNSSYPYIENEFFKRHREYHGKLVELKKGGKSWFVKVQYYERSCRFYAGWRKFKKDCELKIGDICLLELIDEEKLVFEVSIERVHHH* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4770 387 PANTHER B3 DOMAIN-CONTAINING 127 252 - -
Mal1g4770 387 ProSiteProfiles B3 DNA-binding domain profile. 291 385 IPR003340 GO:0003677
Mal1g4770 387 CDD B3_DNA 311 383 IPR003340 GO:0003677
Mal1g4770 387 CDD B3_DNA 161 252 IPR003340 GO:0003677
Mal1g4770 387 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 127 252 - -
Mal1g4770 387 Gene3D - 4 100 IPR015300 -
Mal1g4770 387 Pfam B3 DNA binding domain 307 380 IPR003340 GO:0003677
Mal1g4770 387 Pfam B3 DNA binding domain 163 242 IPR003340 GO:0003677
Mal1g4770 387 SUPERFAMILY DNA-binding pseudobarrel domain 302 383 IPR015300 -
Mal1g4770 387 ProSiteProfiles B3 DNA-binding domain profile. 162 256 IPR003340 GO:0003677
Mal1g4770 387 CDD B3_DNA 7 97 IPR003340 GO:0003677
Mal1g4770 387 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 7 130 - -
Mal1g4770 387 PANTHER B3 DOMAIN-CONTAINING 301 384 - -
Mal1g4770 387 SMART B3_2 9 99 IPR003340 GO:0003677
Mal1g4770 387 SMART B3_2 163 256 IPR003340 GO:0003677
Mal1g4770 387 SMART B3_2 297 385 IPR003340 GO:0003677
Mal1g4770 387 SUPERFAMILY DNA-binding pseudobarrel domain 159 241 IPR015300 -
Mal1g4770 387 Gene3D - 281 386 IPR015300 -
Mal1g4770 387 Gene3D - 142 256 IPR015300 -
Mal1g4770 387 PANTHER B3 DOMAIN-CONTAINING 7 130 - -
Mal1g4770 387 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 301 384 - -
Mal1g4770 387 SUPERFAMILY DNA-binding pseudobarrel domain 8 99 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4770 Mal-Chr1 114731582 114733964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4770 111 244 B3 DNA Binding Superfamily AT3G18990 25.000 9.73e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g4770 B3 1.4e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4770 - - mtr:MTR_1g035620 487.648