Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4769 ATGTCATTTAATCTCCCAAAAGAGTTCTTCAAGATAGTTGTGAATGATGAACTGAAAAACCAAGAGCTTAGGCTTCCCAAGAAATATGTGGAGAATTATTGGAAAGGAATACCAAATCCAGTAATCCTTAAACTCCCAAATGGTGCTCAACAAGAAATATTTTGGGTGGAGCGTGACAATGATATTTGGTTTCAAAAGAAGTGGGATCAATTGGCAAAATTTCTGAAATATGGATATCTTTTAACTTTTAAATACATTGGTGGATCCTATTTCAAGGTTAAGATATTTGATTCCAATACATTGGAAATAGACTATTCTAATATAAAATTCGTAGATGACAATGCCACTAAGAATTTAGATGCTCAAATTAATATTGCTAGTACATCTCAAAGGAGAAAAAGTGGCAAGAGAAAATTCTCAGGTAGTAACAAAGGAGGCATGATTAAGGAGGCTAAAAAATACCCAACAATTAATGGGAATCCAAGTTTTAAACTTAAAATGTCACCATCTTACGCCCAAGGCAATGTGTTGAGGATACCAAGTGAGTTTTCAAGAGAATATTTGAACAAGTTTGAAGGGACTGCAAGTATTAGAGTTGGTGACAACATGGCTATGAAAGTGAAGGTGAATTATAGTGGAACTTGTATTATGACCAAAGGTTGGAAGTTATTTACCAAAAAAAATAACTTGCAAATTGGTGCTATATATAAATTTGAGATGACTCAGCTCCAACCACCTTCATTCACTATTACTATTGCCAAAGGTAATTCTTTCTTGCTTTCTTGA 786 0.3372 MSFNLPKEFFKIVVNDELKNQELRLPKKYVENYWKGIPNPVILKLPNGAQQEIFWVERDNDIWFQKKWDQLAKFLKYGYLLTFKYIGGSYFKVKIFDSNTLEIDYSNIKFVDDNATKNLDAQINIASTSQRRKSGKRKFSGSNKGGMIKEAKKYPTINGNPSFKLKMSPSYAQGNVLRIPSEFSREYLNKFEGTASIRVGDNMAMKVKVNYSGTCIMTKGWKLFTKKNNLQIGAIYKFEMTQLQPPSFTITIAKGNSFLLS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4769 261 SUPERFAMILY DNA-binding pseudobarrel domain 159 249 IPR015300 -
Mal1g4769 261 ProSiteProfiles B3 DNA-binding domain profile. 162 256 IPR003340 GO:0003677
Mal1g4769 261 Gene3D - 4 100 IPR015300 -
Mal1g4769 261 PANTHER B3 DOMAIN-CONTAINING 126 252 - -
Mal1g4769 261 CDD B3_DNA 161 252 IPR003340 GO:0003677
Mal1g4769 261 Gene3D - 142 257 IPR015300 -
Mal1g4769 261 SUPERFAMILY DNA-binding pseudobarrel domain 8 99 IPR015300 -
Mal1g4769 261 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 7 131 - -
Mal1g4769 261 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 126 252 - -
Mal1g4769 261 SMART B3_2 9 99 IPR003340 GO:0003677
Mal1g4769 261 SMART B3_2 163 256 IPR003340 GO:0003677
Mal1g4769 261 PANTHER B3 DOMAIN-CONTAINING 7 131 - -
Mal1g4769 261 CDD B3_DNA 7 97 IPR003340 GO:0003677
Mal1g4769 261 Pfam B3 DNA binding domain 163 242 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4769 Mal-Chr1 114721330 114722471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4769 111 259 B3 DNA Binding Superfamily AT3G18990 24.503 1.09e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g4769 B3 1e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4769 - - mtr:MTR_1g050845 309.301