Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4768 ATGTCATTTCAATATTTCCCAGATTTTCATAGGATAGTATTGCATGATAAGAAGCTTAGGGTTCCAAAGAGATATGTGGAGAAATATTGGAAAGGAATATCAAACCCAATATTTCTTAGACTCCCAAATGGTATTCAACAAGAAATATTTTGGGTGGAGAAAAATGGTGATATTTGGTTTCAAAAAAATTGGAAATTTTTTGCAAAGTCTTTCAAATATGGTTATCTCTTAACTTTTAAACACATGGGTGGATCCTATTTCAAGGTTAAGATATTTGGTGCCAATGCTTTAGAAGTGAACTATTCCACTATAAAATGTGTTGATGAAGTTGTTGAAGATACAAAAGAAGAAATCAAAGAAAATGTTCAAGTGAGTGATGATAGTGAAATACCCAAGAAAGCTCAAAGGACAAGAAATGGCAAGAGAAAAATGAATATGGATTTTGATACTACCCAACAAAAAATCTCTAGTGGTAGCAAAGTAGGAATGGTGAAGAAGTCTAAAAAAAACCCAATAATTGAAGCTGTTAATGAAAATCCATTTTTTGAAGTTAAAATGACTCGATCTTATGCCAATGGCTATTTCTTGAAGATACCATGTGATTTTTCAAGAAAATACTTGAAGGAGTTTAAAGGGATGGTATGCATTAGAGTTGGTGATGACATGCCTATGAAAGTGAAGATGAAGTTTGATGGTACCTTTACTAATAGAGCATCTGTTGTGACTACTGGTTGGAAGTTATTTGTCCAAAAATATAACTTGCAAGTTGGTGATGTATGTAAATTTGTGATGACTCAACTCCAACCACTCTCATTCACTATTACTATTACTCCAGCTAGCAAGGAACCAAGCTCAAAGAAGTTAAAGATGCAAGAGTTTTCCAAAGGAGTTTATGAAAAGAGGATGTGA 909 0.3311 MSFQYFPDFHRIVLHDKKLRVPKRYVEKYWKGISNPIFLRLPNGIQQEIFWVEKNGDIWFQKNWKFFAKSFKYGYLLTFKHMGGSYFKVKIFGANALEVNYSTIKCVDEVVEDTKEEIKENVQVSDDSEIPKKAQRTRNGKRKMNMDFDTTQQKISSGSKVGMVKKSKKNPIIEAVNENPFFEVKMTRSYANGYFLKIPCDFSRKYLKEFKGMVCIRVGDDMPMKVKMKFDGTFTNRASVVTTGWKLFVQKYNLQVGDVCKFVMTQLQPLSFTITITPASKEPSSKKLKMQEFSKGVYEKRM* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4768 302 ProSiteProfiles B3 DNA-binding domain profile. 181 280 IPR003340 GO:0003677
Mal1g4768 302 PANTHER B3 DOMAIN-CONTAINING 6 276 - -
Mal1g4768 302 Gene3D - 162 281 IPR015300 -
Mal1g4768 302 Pfam B3 DNA binding domain 182 266 IPR003340 GO:0003677
Mal1g4768 302 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 6 276 - -
Mal1g4768 302 SUPERFAMILY DNA-binding pseudobarrel domain 13 95 IPR015300 -
Mal1g4768 302 CDD B3_DNA 180 276 IPR003340 GO:0003677
Mal1g4768 302 SMART B3_2 182 280 IPR003340 GO:0003677
Mal1g4768 302 SMART B3_2 9 95 IPR003340 GO:0003677
Mal1g4768 302 CDD B3_DNA 13 92 IPR003340 GO:0003677
Mal1g4768 302 Gene3D - 3 96 IPR015300 -
Mal1g4768 302 SUPERFAMILY DNA-binding pseudobarrel domain 178 276 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4768 Mal-Chr1 114652351 114657622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4768 7 275 B3 DNA Binding Superfamily AT3G18990 24.405 4.41e-20 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g4768 B3 6.4e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4768 - - mtr:MTR_1g035640 388.267