Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4763 ATGTCATTGTATCACCCACGGAAGTTCTTCAAGATCATGCAAAATCATGAACTTCAAAAAGGAGAGCTTAAGGTTCCCAAATATTTTGTGAAGTTACATTGGAAAAAAGTATCAAATCCAGTTGTCTTTACTCTCCCAAATGGTGCTACACAGGAAATATTTTGGGTGGAGCGTAATGGTGATATTTGGTTTCAAAAGAATTGGGAAAAGATTGCAAAGTTTCTACAACATGGATATAATGTAAATTTTAAGTACATAGGAGGATCATATTTCAAAGTTGAGATATTTGGGGTCGATACATTGGAGATAGACTATTCCAATATAAAATTCAAAGATGAAGTTTGTGAAGCTACAAAAGATGTTGAATTGAGTGATGAAAGTGAAATTCAAAGAACCAAAAAGGGCAAGAGAAAAATGGACTTTGATGCTACCCAGCAAAAATTCTCCGGTAGTAGCAGAGGAGGCATAATTAAGAAGGCTAAGAAATGCTCAACACCTGATGCTCTTGATGAAAGAGTCAATAATGAGAATCCCTCTTTTGAATCTACAATGACACCATCTTACGCCCATGGCTATATGCTGGTGATACCAAGTAAGTTTTCAAGAGAATACTTGAACAAATATGTAGGGCCTGCAACCATTAGAGTTGGTGAGGACGTGGCTATGAAAGTGAATGTGGCATTCGAAGATACCAATAGAAGAAGATCTATGGTGACTACCGGATGGAAGTCATTTAACCAAAAATATAACTTGGAAGTTGGTGATGTATGTAAATTTGTCATGACTCATTTCCAACCACTTTCATTCACTGTTACTATTAACCGAGCCAAAGAAGAACCAAGCCCTAAGAAGTTGCAAGGTTATAAAGAAGGTATCTCTTGTGATAATAATGCAAAAAGAAAAGGCATTAAAGGAACTTCTAGGAGCTGCTCACAAATACCTCTTCTTCAGAATCTAGAAGGTCGCGATGTGATGAAAATTGAAACATAA 990 0.3636 MSLYHPRKFFKIMQNHELQKGELKVPKYFVKLHWKKVSNPVVFTLPNGATQEIFWVERNGDIWFQKNWEKIAKFLQHGYNVNFKYIGGSYFKVEIFGVDTLEIDYSNIKFKDEVCEATKDVELSDESEIQRTKKGKRKMDFDATQQKFSGSSRGGIIKKAKKCSTPDALDERVNNENPSFESTMTPSYAHGYMLVIPSKFSREYLNKYVGPATIRVGEDVAMKVNVAFEDTNRRRSMVTTGWKSFNQKYNLEVGDVCKFVMTHFQPLSFTVTINRAKEEPSPKKLQGYKEGISCDNNAKRKGIKGTSRSCSQIPLLQNLEGRDVMKIET* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4763 329 SUPERFAMILY DNA-binding pseudobarrel domain 7 98 IPR015300 -
Mal1g4763 329 Gene3D - 159 279 IPR015300 -
Mal1g4763 329 PANTHER B3 DOMAIN-CONTAINING 6 276 - -
Mal1g4763 329 Gene3D - 4 99 IPR015300 -
Mal1g4763 329 SUPERFAMILY DNA-binding pseudobarrel domain 174 276 IPR015300 -
Mal1g4763 329 CDD B3_DNA 178 275 IPR003340 GO:0003677
Mal1g4763 329 ProSiteProfiles B3 DNA-binding domain profile. 179 277 IPR003340 GO:0003677
Mal1g4763 329 Pfam B3 DNA binding domain 180 275 IPR003340 GO:0003677
Mal1g4763 329 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 6 276 - -
Mal1g4763 329 SMART B3_2 180 277 IPR003340 GO:0003677
Mal1g4763 329 SMART B3_2 9 99 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4763 Mal-Chr1 114389177 114396302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4763 6 278 B3 DNA Binding Superfamily AT3G18990 23.977 9.23e-15 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g4763 B3 7.9e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4763 - - mtr:MTR_1g050845 368.622