Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4739 ATGAGGAATAACCAAGAAAGAAAGGGGACTTTGTCATCTGGGGAGCCTTCACAGAGAGAAGGACCCTCTGAATCGATTCATCCCTTGATTGATTTAGAGGAAAAAGAAGATGACGTCATTGAAACGTCACCTAGAGCTTTCTTTGAGGCAATGGCAAATGCGAGGAGAACTCGAGCCAGGATTGGAGATGACTTTAATATGGAGAATCAAACCATACCAATTGATGCTATTTATATAGATTTGCAAGGGAGTACCAGTGAGGCGGTTGAAAATGTCGTGATGTCATCAAAAACAAATAAGGAAGATCAAGAGCCTCAGAATCAGACACCTGAACTTCCAAATGAGAACAGATTTAAATGCCCAATATGTATGGATCCTTTTGAGGAGGAAATGGCAACAAGATGTGGCCATATTTTTTGCAAAAAGTGTATCAAAACTGCATTATCTGCAAATCGTGTATGCCCTAAATGTGGAAAAAAGGCTACTCCTAGGGGCCTAGTAAGGGTGTATCTTCCATGTTCCAAATGA 528 0.4072 MRNNQERKGTLSSGEPSQREGPSESIHPLIDLEEKEDDVIETSPRAFFEAMANARRTRARIGDDFNMENQTIPIDAIYIDLQGSTSEAVENVVMSSKTNKEDQEPQNQTPELPNENRFKCPICMDPFEEEMATRCGHIFCKKCIKTALSANRVCPKCGKKATPRGLVRVYLPCSK* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4739 175 Pfam Zinc finger, C3HC4 type (RING finger) 119 157 - -
Mal1g4739 175 PANTHER RING ZINC FINGER-RELATED 7 172 - -
Mal1g4739 175 SUPERFAMILY RING/U-box 105 162 - -
Mal1g4739 175 MobiDBLite consensus disorder prediction 1 20 - -
Mal1g4739 175 ProSiteProfiles Zinc finger RING-type profile. 120 157 IPR001841 -
Mal1g4739 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 172 IPR013083 -
Mal1g4739 175 MobiDBLite consensus disorder prediction 1 37 - -
Mal1g4739 175 SMART ring_2 120 157 IPR001841 -
Mal1g4739 175 MobiDBLite consensus disorder prediction 96 115 - -
Mal1g4739 175 PANTHER ELFLESS, ISOFORM B 7 172 - -
Mal1g4739 175 MobiDBLite consensus disorder prediction 96 114 - -
Mal1g4739 175 ProSitePatterns Zinc finger RING-type signature. 135 144 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4739 Mal-Chr1 113323859 113327394 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4739 2 175 C3H Transcription Factor Family AT5G48655 34.826 4.73e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4739 K22651 - gmx:100792853 132.494