Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4722 ATGGATTGTTCCTTCATTCCTTTCTCATCAAAGTCCAATTTTTTTCCACAATCTCCATTTGTGTCACAAGATTCAATCTCTTTGAATCCAAAAAACCAAGAGTTTCTCCCTTTCAATGAAAATGACCCAGAAGAGATGCTTCTATATGGTATGATAACATCATCACCACAACAACAAACTCTAATTTCCAATAGCAAAGAAACAACAAAAAAGAACAACAAAGAGAAGAACAACAAGTCCTATAGAGGTGTTCGAAGGCGTCCATGGGGGAAATTCGCGGCCGAGATAAGGGACTCAACAAGACATGGCATAAGGGTATGGTTAGGAACATTTGATAGTGCTGAAGCAGCTGCACTTGCTTATGATCAAGCTGCTTTTTCAATGAGAGGTTCAGCTGCAACACTTAATTTTTCAGTTGAGAAGGTTAAGGAATCACTTAGGGACATGAATTATGTGTTGTCTAATGATGATGAGTGTTCTCCTGTTGTGGCTTTGAAGAGAAAACACTCCATGAAACGTAAAATGGATGAAAAGAAGAAGAAACATGAGACAGATGTTAGGATAGATAATTTGGTTGTGTTTGAAGATCTTGGTGCTGATTATTTGGAACAATTGTTGATGTCTTCTGATGACAATCAAAATACTTGGTGA 651 0.3748 MDCSFIPFSSKSNFFPQSPFVSQDSISLNPKNQEFLPFNENDPEEMLLYGMITSSPQQQTLISNSKETTKKNNKEKNNKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAATLNFSVEKVKESLRDMNYVLSNDDECSPVVALKRKHSMKRKMDEKKKKHETDVRIDNLVVFEDLGADYLEQLLMSSDDNQNTW* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4722 216 Gene3D AP2/ERF domain 79 140 IPR036955 GO:0003700|GO:0006355
Mal1g4722 216 PANTHER DNA-BINDING DOMAIN 26 208 IPR044808 GO:0003700|GO:0009873
Mal1g4722 216 Pfam AP2 domain 80 130 IPR001471 GO:0003700|GO:0006355
Mal1g4722 216 CDD AP2 81 137 IPR001471 GO:0003700|GO:0006355
Mal1g4722 216 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Mal1g4722 216 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Mal1g4722 216 ProSiteProfiles AP2/ERF domain profile. 80 138 IPR001471 GO:0003700|GO:0006355
Mal1g4722 216 SMART rav1_2 80 144 IPR001471 GO:0003700|GO:0006355
Mal1g4722 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 26 208 - -
Mal1g4722 216 SUPERFAMILY DNA-binding domain 80 139 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4722 Mal-Chr1 112692759 112693409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4722 36 216 AP2-EREBP Transcription Factor Family AT3G23240 65.241 8.11e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g4722 AP2 7.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4722 K14516 - gmx:100780576 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3837 3 116202298 116203014 Mal1g4722 1 112692759 112693409 PCT