Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4710 ATGTGTTTTTTTGTAGGAAAATCATCTGCTAAGATAACACAAATCTCAGATATTGTTGGTGGAAGGATTGATTTCAACTTGAAGGTCAGAGTGATTAATATGTGGACCATACCAGATCGTGTGAGTCCTTCTGAGATTGGAAGTCTTAACATGGTATTGCTTGATGAAAAGTGTGGTAAAATTCATGCCACAATAAGGAAGAATCTGCTACATATGTTGTTGAGAAATTCATGGTCGCAGAATGATCCTACATTCAAGACGACGAACCATAAATACAAATTGAACTTTATGGGAGGAACGACTGTTTTCAAGGTTAATGCTGCTGAGATCCCTCATATGTCTTTCAACTTTATGACTTTCCTGGAGATATTGGCTACCAACAAGGAAGATCGTTTACTTGATGTAATTGGTCATGTCGTTGAGAAGGACACTGTCAAGGAAACTGAGAAGAATGGAAAGACTAACAAGGTGTTGGATGCGACTTTGGAGGACTTGTTGGGAAACAGAATACATTGCACAATCTGGGATGACTTTGCTGTCAAAATGCAAGCTTGCTTGGATACTCATGACTCCTCAGTTCCTGTTGTTGTTATCTTACAACAGTGCAAGCTTAAGAAGTATTTCGGTGCAATGGGTATCTCTAATGCTTTTTATGGAACCAAAATGCTATTGAATCCAAACATACTTGAAGTTTCTGATTATATAGAGAGTATGAATGGTGCTGATGTTGAGCTCACTCAAGTTGTAAGCCAAATGAGCGGGCCGACTATCGTATCTTTGTCTGATGATTTACTACAAACTAAGAGAATGACCATCGAGGATTTGCTTGAAACTACTGAGAAATGTGTTGCAACTGTCCTGGCAAGAACATGTGAGCTGGAAATCGATGGTGGATGGTTTTATCGAGCATGTAGCAAGTTTGCAACTAGAATAACTGCCATTAACAGGAAAATTTACTGTGACAGATGCAGCATGCCAAGAAATGTTGTTCCTAGGTTCAAGGTCAACATTCACGTGATTGATAATACTGGCTCAACCACATTTGTTATGTTTGATCGTGTTGTGTCTCAAGCTATGGAAAGGTATGCACAAGATTTCCTTGACTCCATGGATCTGCTTGATATGTTTGTCGACAAGCGGATGCTCTTCAAGGTTGAAGTCAGTGATGCCAACCTGTACCGTAACTGGCGCAGCTATACTGTTAAAAAACTGACTATGGATGAGGAGATAATTAAGAAGTTTCTGACACTTCGTGGGATAAATAAAGTCGAAGGAGTTAATTCAAGTGAAAAAGATGATGTTGCTGCAGTTGATTCAGATGTGACTCCAACCAGTAAAGGACTGGGAAAGAGAGCTGCTGATAGTGTTCAACCATTGGATGATTTTGAGATCGTTGGATGTGATGCTTCTACCATTAAAGAGCCCAAAATGTTGCGTGTCAAGATTGAAGCTTATGACTGA 1461 0.3956 MCFFVGKSSAKITQISDIVGGRIDFNLKVRVINMWTIPDRVSPSEIGSLNMVLLDEKCGKIHATIRKNLLHMLLRNSWSQNDPTFKTTNHKYKLNFMGGTTVFKVNAAEIPHMSFNFMTFLEILATNKEDRLLDVIGHVVEKDTVKETEKNGKTNKVLDATLEDLLGNRIHCTIWDDFAVKMQACLDTHDSSVPVVVILQQCKLKKYFGAMGISNAFYGTKMLLNPNILEVSDYIESMNGADVELTQVVSQMSGPTIVSLSDDLLQTKRMTIEDLLETTEKCVATVLARTCELEIDGGWFYRACSKFATRITAINRKIYCDRCSMPRNVVPRFKVNIHVIDNTGSTTFVMFDRVVSQAMERYAQDFLDSMDLLDMFVDKRMLFKVEVSDANLYRNWRSYTVKKLTMDEEIIKKFLTLRGINKVEGVNSSEKDDVAAVDSDVTPTSKGLGKRAADSVQPLDDFEIVGCDASTIKEPKMLRVKIEAYD* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4710 486 CDD RPA1_DBD_A_like 27 102 - -
Mal1g4710 486 PANTHER BNAC07G49340D PROTEIN 71 415 - -
Mal1g4710 486 Gene3D - 10 104 IPR012340 -
Mal1g4710 486 Gene3D - 257 415 IPR012340 -
Mal1g4710 486 SUPERFAMILY Nucleic acid-binding proteins 115 239 IPR012340 -
Mal1g4710 486 Gene3D - 108 247 IPR012340 -
Mal1g4710 486 CDD RPA1_DBD_B_like 134 238 - -
Mal1g4710 486 PANTHER REPLICATION FACTOR A 1, RFA1 71 415 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal1g4710 486 SUPERFAMILY Nucleic acid-binding proteins 11 105 IPR012340 -
Mal1g4710 486 SUPERFAMILY Nucleic acid-binding proteins 267 405 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4710 Mal-Chr1 112447622 112450462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4710 25 352 Core DNA Replication Machinery Family AT5G08020 23.380 2.11e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4710 - - mtr:MTR_1g105785 404.831