Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4688 ATGGAGTTAGAGATGATAACTTCAAGTGAAGAGAGTGATGAGCAAGAAGTTCAAGATGAATGTATAGTAACCAAGAGATTTTATGATTGCACATTTTGCAAAAGGGGTTTCACTAATGCTAGGGCATTAGGTGGCCACATGAATATTCATAGGAAAGAAAGAACAAATTATAAGGCCAAGCAAGGCACACCCAATTCATCACCTTTTGTTTGCATTTTGGAACCTCCTATGTATCATCAAACATCAAAAACAAACCCTAGAAACCCTCCACCTACATTTCAATATGATTTTCTTAACAAAAGTTCTCAATCTTTGTTGGGAACCAATTTGAGTCTCCAAATTGGTTCAATCCATGAGGGTAATGATCAAGTTTGGAGAGGAATTGAGAAAGATGGTGAAGGGGTTGACCTAGAGCTTAGGCTTGGTCATGATTCTTACTCAAACTACTAA 450 0.3733 MELEMITSSEESDEQEVQDECIVTKRFYDCTFCKRGFTNARALGGHMNIHRKERTNYKAKQGTPNSSPFVCILEPPMYHQTSKTNPRNPPPTFQYDFLNKSSQSLLGTNLSLQIGSIHEGNDQVWRGIEKDGEGVDLELRLGHDSYSNY* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4688 149 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Mal1g4688 149 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 8 95 - -
Mal1g4688 149 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Mal1g4688 149 PANTHER OS07G0101800 PROTEIN 8 95 - -
Mal1g4688 149 Gene3D Classic Zinc Finger 7 68 - -
Mal1g4688 149 SUPERFAMILY beta-beta-alpha zinc fingers 25 55 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4688 Mal-Chr1 111447541 111447990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4688 27 142 C2H2 Transcription Factor Family AT5G43540 37.931 3.12e-15 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g4688 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4688 - - mtr:MTR_1g044225 281.567