Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4682 ATGATGGAGAATCTTCTCACTTGTAATGATCGATCGATAACTCATTCTGATTTTCATGATGTGTCCCAAAATGATTTTGTTGAAGAAGAGAACATTGAACCTCATGATGTGTCCCAAAATGATGTTGTTGAAGAAGAGAACATTGAGCCTCAAGTTGGAATGGAATTTGAATTACTGTCAAAAGCTATGGAATTTTATACATTATTTGCTAAGGTAAAAGGATTTGGGATTCGTATACGTTCTAGGAAGGAAAATACTTGTACTTTGGTATGTGTCAGGGAAGGTAAACTACCTTTAAAAAAAAATGATGGCAACATGGAAGTGAAGAAGAAATGTTCAACCATGCGCATGGGATGTAAAGCATCGCTCGTTTTATCAAAAGAAAATACTGGAGACACATGGGCTATAAAATCTTTTGACAATAATCACAATCATGCCATGGTTAGTCCCAAAAGTGTAACTTATTTCAGGTGTCATAAGAAAATAAATGTTGCTGCAAAAAACCTCATTGAGAAGTTTAATGAAGAAGGTTTGCCCACCGGAAAGGTTGCTACAATGTTTAACAACAGTGATTTAGCTTTTTCTAATAGAGACTGTTGGAATCACATGAGAAATGTTCGAAAGAAGACTTTAGATGTTGGAGATGCACAAGCCGTTTTTAATTATTGCAAACACATGCAAGCTCAAAATTCAGATTTTTTCTATGCCATACAATGTGACGATGAAGCTAGAATGATAAATTTTTTTTGGGTTGATGCTAGATCAAGGTTAGCTTATCAACGCTTTGGAGACGTTGTTACTTTTGATACCACATACAAAACAAACAAATATAGCATGCCATTTGCCCCATTTACTAGGTTAAACCATCACCTCCAATCAATTTTATTTGGTTGTGCATTATTACAAGACGAGACTGAGATATCATTTACATGGTTATTTGAAACTTGGCTTCAGGCAATGAATGGGAAAAAACCGGTATCTATAATAACTGACCAAGATTTAGCTATTGGAGCTGCGGTTGCTAAGGTATTTCCACAGACACGTCATCGTCTATGCTTGTGGCACATTAGAAAGAAATTTCCAGAAAAGCTTGCTCATATTTATCACAAAAGATCAACATTCAAGCGTGAGCTAAAGAGATGTATTCGAGAATCGCCAACTATCAAGGATTTCGAAGATGATTGGAAGCGAATAATGGATACATACAATCTACAAGAAAATGAATGGCTTCAACGGTTGTTTGAAATTAGAGAGTCATGGATACCAATTTATAATAGAGGAACTTTTTTTGCAGGTATGAATACTACACAAAGAAGTGAGAGTATCAACTCTTTTTTTGACTCCTTTGTTAATTCAACCACCACACTACAAGACTTTGTGGTAAAATTTGAGAAGGCAGTTAATAACCGTTATGAAGCTGAAAAAAGAGAGGACTTTGAGTCTATACATAAATTACGCATTTTGAGTATCGGCTCACAAATTGAAAAGCATGCGGCATCAATTTACACGAGAAATGTGTTTGGTAAGTTTCAAAATGAGCTTTCTCTTGTCAGCCACTTTACAAAGAAGAAGATTGAGAAAAATGGCTTGCAATATAAGTATCAAATATCTAATTGTGATGATTCTCGTGATACATTCATGGTTGATATAAATTTAGAGTCAAAGAACGCTAGGTGTGATTGCCAACTTTTTGAATTTCTGGGAATACTATGTAGACACATTTTGGTAATTTTTCAAGCCAAAAATATACTTGAAATTCCTAGTCAATATATCTTACAACGTTGGACTAAAGAAGTCAATAGAGACATGGAGGTTTGTGTTATGGATGTTCAGAATCATGAGTCAGGTATTTTGAGAAGCATGCATGTGCAACAGCATTTTAGCAAATTTTCAGATTTTGCTAACCGATCAAAAAAAGCATACACATTTATTATTGCGGAATTTCATCATATTGGTAACACAATTGCAACAATGGAATTAGAGCTGCCAGATGTAAATGAAGCTCTTGTAGATTCACAACAGCAAAATTTGACGGATGACACATTTGATAATGCTCTAAATATTAATATCAAAGACCCTCATGCATCACAAACAAAAGGTAGAAAAAGGAAATGCTCTGACAACACACATGCAGCAGAAAGATATAAAAGTGGCCTAGAATTGTCAATGGATAAGGCGTTAGTTAAAAGGAGGACATGCAAATCTTGTGGAGAGCCTGGTCACTATCAATCAACATGCAAAAATAAATCAACTTAG 2256 0.3493 MMENLLTCNDRSITHSDFHDVSQNDFVEEENIEPHDVSQNDVVEEENIEPQVGMEFELLSKAMEFYTLFAKVKGFGIRIRSRKENTCTLVCVREGKLPLKKNDGNMEVKKKCSTMRMGCKASLVLSKENTGDTWAIKSFDNNHNHAMVSPKSVTYFRCHKKINVAAKNLIEKFNEEGLPTGKVATMFNNSDLAFSNRDCWNHMRNVRKKTLDVGDAQAVFNYCKHMQAQNSDFFYAIQCDDEARMINFFWVDARSRLAYQRFGDVVTFDTTYKTNKYSMPFAPFTRLNHHLQSILFGCALLQDETEISFTWLFETWLQAMNGKKPVSIITDQDLAIGAAVAKVFPQTRHRLCLWHIRKKFPEKLAHIYHKRSTFKRELKRCIRESPTIKDFEDDWKRIMDTYNLQENEWLQRLFEIRESWIPIYNRGTFFAGMNTTQRSESINSFFDSFVNSTTTLQDFVVKFEKAVNNRYEAEKREDFESIHKLRILSIGSQIEKHAASIYTRNVFGKFQNELSLVSHFTKKKIEKNGLQYKYQISNCDDSRDTFMVDINLESKNARCDCQLFEFLGILCRHILVIFQAKNILEIPSQYILQRWTKEVNRDMEVCVMDVQNHESGILRSMHVQQHFSKFSDFANRSKKAYTFIIAEFHHIGNTIATMELELPDVNEALVDSQQQNLTDDTFDNALNINIKDPHASQTKGRKRKCSDNTHAAERYKSGLELSMDKALVKRRTCKSCGEPGHYQSTCKNKST* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4682 751 Pfam FAR1 DNA-binding domain 64 148 IPR004330 -
Mal1g4682 751 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 679 IPR031052 GO:0006355
Mal1g4682 751 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 44 679 - -
Mal1g4682 751 Pfam SWIM zinc finger 555 582 IPR007527 GO:0008270
Mal1g4682 751 SMART 26again6 557 584 IPR006564 GO:0008270
Mal1g4682 751 ProSiteProfiles Zinc finger SWIM-type profile. 546 582 IPR007527 GO:0008270
Mal1g4682 751 ProSiteProfiles Zinc finger CCHC-type profile. 733 748 IPR001878 GO:0003676|GO:0008270
Mal1g4682 751 Pfam MULE transposase domain 265 359 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4682 Mal-Chr1 111224269 111226524 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g4682 MULE 2.1e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4682 - - qlo:115970754 848.195