Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4650 ATGTTGCAAGATGTTATCCATCCTCCATCACATGATGACCAACTATCCATTGATGAAATTTCAAGTCCAATTAGTGCACAAATTTTTGAACTTTGTGACCCTGATTTGTTCCAAGACTCTCTACAACAACAACAACAAAATTCTGATGTTACTTCTACCTCAAATTGTTGTCATGAAGAAAACAACAATAACATCAACAACAACAACAATTCTTCATATACCTTAAACAACATGTCTCAAGCTTTAGATTTAGACAATAACATAAATAGCAATAACAATAGCAATAGCAATAGTACTGCAACAACTACTAGCACAACAAGCCCTACCAACACAAACACAAACATCAACAACAACAATAAAAATAATCTTTCAATTATCTTTGATTCACAAGAAGAAATTGACAATGACATATCAGCTTCTATAGATTTTTCTTCATCACAATCATTTCTCGTTCCGCCGCTTCTTCCAATCAATACTCATCAAGAACAATTTGATTTCTCATCAACACAGACTCATCATCTTCAATATCAAACTGTTCCTATACCTTCAGCAGCACCTCTTATTGGTGCTTCATTCCCTTCTGTATTTGAAGATGATTGCATATCTTCAATTCCTTCTTATTCTACTTCTTGTTCTTATCTTAGTAATAATGGTTTAGGTGTGTATATGCCTCAAGGAAATCTTGGTAGTGCTTTATCTGCTGATAGTTCTAGCTTATTTGGTGGAGGAATTCTATTAGGTTCTGAAATGCAAACTCAAGATTTGGATTATCAAGGTGAAAATGGTGGAATTTATTGTACAGATTCTGTTCAGCAGGTTTTTAACCCTCAAGATTTTCAGGCACTTGGTAATGAGAGTCACAAACTAGTAGCTGGTGCTGGAAGTTGTTCTGCCACTTTAGCACCAGAAATCTCACACTTGGAGGACTCTTCTTTAAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAGAAGATTCATAGATATATGAAGAAGAGAAATGAAAGAAATTTCAGCAAGAAAATCAAGTATGCTTGTCGAAAAACTTTAGCCGATAGTCGGCCACGAGTTAGAGGAAGGTTTGCAAAGAATGATGATTTTGGAGAGACTCATAGGCAAGGTAGTAGCAACCATGAAGATGATGATGAAATAGCTGTTAAAGAAGAAGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGACTTAACTCCTTCAAATGCAACTATTCCATCCAGTCATTGATTTGA 1257 0.3524 MLQDVIHPPSHDDQLSIDEISSPISAQIFELCDPDLFQDSLQQQQQNSDVTSTSNCCHEENNNNINNNNNSSYTLNNMSQALDLDNNINSNNNSNSNSTATTTSTTSPTNTNTNINNNNKNNLSIIFDSQEEIDNDISASIDFSSSQSFLVPPLLPINTHQEQFDFSSTQTHHLQYQTVPIPSAAPLIGASFPSVFEDDCISSIPSYSTSCSYLSNNGLGVYMPQGNLGSALSADSSSLFGGGILLGSEMQTQDLDYQGENGGIYCTDSVQQVFNPQDFQALGNESHKLVAGAGSCSATLAPEISHLEDSSLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETHRQGSSNHEDDDEIAVKEEDDMVDSSDIFAHISGLNSFKCNYSIQSLI* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4650 418 MobiDBLite consensus disorder prediction 358 383 - -
Mal1g4650 418 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 17 418 - -
Mal1g4650 418 MobiDBLite consensus disorder prediction 358 382 - -
Mal1g4650 418 MobiDBLite consensus disorder prediction 42 118 - -
Mal1g4650 418 ProSiteProfiles CCT domain profile. 322 364 IPR010402 GO:0005515
Mal1g4650 418 PANTHER CCT MOTIF FAMILY PROTEIN 17 418 - -
Mal1g4650 418 Pfam CCT motif 322 364 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4650 Mal-Chr1 109198299 109202783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4650 322 378 C2C2-CO-like Transcription Factor Family AT5G57660 46.774 2.02e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g4650 CCT 5.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4650 - - gmx:100793417 483.411