Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4643 ATGGTTAGCATTGTATTTGGGATATACTATTCTCTATCAGCAAGGATCAAATTGTCCACAATTTTGAAAACAAATCTTATCGTAGCTGTTAAGAAAGTTTCCCATGAATCAAAACAAAGGCTGAGGGAATTTGTGTCTGAAATCGCCGACATAGGCCGGCTTCGCCACCAGAATTTGGCTCAATTACTCGGGTGGTGTCGCCGTAAAGATGACCTCCTACTTGTGTACGATTTCATGGCTAATGGAAGTTAA 252 0.4087 MVSIVFGIYYSLSARIKLSTILKTNLIVAVKKVSHESKQRLREFVSEIADIGRLRHQNLAQLLGWCRRKDDLLLVYDFMANGS* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4643 83 ProSiteProfiles Protein kinase domain profile. 1 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4643 83 Gene3D Phosphorylase Kinase; domain 1 6 80 - -
Mal1g4643 83 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 21 83 - -
Mal1g4643 83 PANTHER - 21 83 - -
Mal1g4643 83 Pfam Protein tyrosine and serine/threonine kinase 23 83 IPR001245 GO:0004672|GO:0006468
Mal1g4643 83 SUPERFAMILY Protein kinase-like (PK-like) 17 83 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4643 Mal-Chr1 109051174 109051644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4643 28 83 Receptor kinase-like Gene Family AT3G55550 75.000 7.99e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal1g4643 PK_Tyr_Ser-Thr 3.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4643 - - sly:101247920 106.301