Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal1g4607 | ATGGCTAAAAACTTTGCTGCTTCTTATTCTTCTTGTATCACCACAAACACCCATGATGATGATGATCATGTAACAAACACAAAACTCACCAGAAAACGAAAACGTGATCATGCTCTTGGAAGAAAAAGAAGGAATAACAACTGGGGAAAACTCACTTCTCATTCATCTTCCTATCTTTTCAACCCTTATCATCATGATACCAATGATGTTTGTCTCTGCCTTTCACTTTCTTGCCGCCTTCGTGCGGCCACAACCACCCATGATCATGAGACCTCAAACAAGAAAAAGAAGACATGCAACGATGATGCTGCTGCTGTTGGGAAACACAACAACTTGCAACTCCTTCAGCCCGTTCATGATTCCACCGTCTGTCTACATTTATCACTGGCTTCCCCCTCCTGCTCCTGCTGCGATCAAATCTCAAAGAAACAAAAACTTAGGGTTCAAGAAACCAAAACCAAGGCAAAGAAACGAAAACTTGGGGATCAAGAAACTAAAACAAAGGCAAAGAAACAAAAACTTGGGGATCAAGAAACCAAAATCAAGAAAACATCTTGCAACGCTGTTGATGATCAACAATGGGAGATTAAGAAGGTTCTTCAAAAAAGTGATATCTGCACCAATGCACGTAGGCTTCTGTTGAATATGGAGTTGGCAGAGCAATTTGTCATTCCTCACTTGTTGGGTGGTGCTGAAGCTGCTCTCAAAGGAGTCCAAGTTCAAGTTTTGGACATTGACACCAATTCTTCTCATTCTCTAGTTTTCAAGATATGGACTTCCGCAAAAAGCCACGTCTTCATCGAGACTTGGATTGAAGACTTTGTTCAGAGGAGGAATTTGAAGAAAGGCGATCAAATCGGCCTTCGTTGGGATCAAGTCAACAACTGTTTTGATTTCTCAGTTCTTCAACAATCGATTTGA | 921 | 0.4115 | MAKNFAASYSSCITTNTHDDDDHVTNTKLTRKRKRDHALGRKRRNNNWGKLTSHSSSYLFNPYHHDTNDVCLCLSLSCRLRAATTTHDHETSNKKKKTCNDDAAAVGKHNNLQLLQPVHDSTVCLHLSLASPSCSCCDQISKKQKLRVQETKTKAKKRKLGDQETKTKAKKQKLGDQETKIKKTSCNAVDDQQWEIKKVLQKSDICTNARRLLLNMELAEQFVIPHLLGGAEAALKGVQVQVLDIDTNSSHSLVFKIWTSAKSHVFIETWIEDFVQRRNLKKGDQIGLRWDQVNNCFDFSVLQQSI* | 307 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal1g4607 | 306 | MobiDBLite | consensus disorder prediction | 22 | 48 | - | - | |
| Mal1g4607 | 306 | CDD | B3_DNA | 194 | 302 | IPR003340 | GO:0003677 | |
| Mal1g4607 | 306 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 95 | 304 | - | - | |
| Mal1g4607 | 306 | SUPERFAMILY | DNA-binding pseudobarrel domain | 191 | 301 | IPR015300 | - | |
| Mal1g4607 | 306 | MobiDBLite | consensus disorder prediction | 149 | 171 | - | - | |
| Mal1g4607 | 306 | MobiDBLite | consensus disorder prediction | 155 | 171 | - | - | |
| Mal1g4607 | 306 | Gene3D | - | 187 | 304 | IPR015300 | - | |
| Mal1g4607 | 306 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 95 | 304 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal1g4607 | Mal-Chr1 | 107819710 | 107820630 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal1g4607 | 196 | 282 | B3 DNA Binding Superfamily | AT1G20600 | 34.483 | 4.69e-06 | 45.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal1g4607 | - | - | mtr:MTR_1g045740 | 293.508 |