Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4581 ATGACTAGCAATGTCAAGGAATTCCCTGACTTCTTCAAAGTCTTCCTCATAGAGAAGCATTATGATAGAATGCTTATCCCAATTGCTTTTGTGAAGCTCATGCTTTCGAAACAAAGGATATTGAAATATTTTATCCTAAGAGATCGTAGAGGAAGAGATTGGCATGTCAGAGCACGTTCTATTGGCGGCAAGCTTTATTTTGATGATGGTTGGAAATTATTCAGAGAAGAAAATTCTTTAGAGGACAATGACTTCCTTGTTTTCACACATATTGAAAACAATGTATTCAAGTTCAAAATCCTTGAACAATCATCAATGTGTGAAAAGATGAATGTACTGGACGAGGAGGAAAATAGTAATATGTTGGAGGATGAGGAAAAGGAAGATGATGATGATGACGACGATGATGGTGATGGTGATGGTGAAGATGATGATGATGATGATGATGATAATGACGACGATTATACAATGGTAGAGGAAGAAGATCATGATGAAGAAGAAGATGCTGATGATGCAGATGATGATGAGGATGTTGATGATGAGGATGATGATGTGCATATAATAATGAAAAAAGAAAAGAATAAAGGGGTTGACAAGGGAATCAGTAGAAGCTATGAGCATCAACATTGGAGAACCTGCAAAGCATGTATGTTTTTGACATCATACTAA 669 0.3632 MTSNVKEFPDFFKVFLIEKHYDRMLIPIAFVKLMLSKQRILKYFILRDRRGRDWHVRARSIGGKLYFDDGWKLFREENSLEDNDFLVFTHIENNVFKFKILEQSSMCEKMNVLDEEENSNMLEDEEKEDDDDDDDDGDGDGEDDDDDDDDNDDDYTMVEEEDHDEEEDADDADDDEDVDDEDDDVHIIMKKEKNKGVDKGISRSYEHQHWRTCKACMFLTSY* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4581 222 SMART B3_2 11 104 IPR003340 GO:0003677
Mal1g4581 222 MobiDBLite consensus disorder prediction 184 202 - -
Mal1g4581 222 ProSiteProfiles B3 DNA-binding domain profile. 9 104 IPR003340 GO:0003677
Mal1g4581 222 MobiDBLite consensus disorder prediction 118 183 - -
Mal1g4581 222 CDD B3_DNA 9 101 IPR003340 GO:0003677
Mal1g4581 222 PANTHER B3 DOMAIN-CONTAINING 5 195 - -
Mal1g4581 222 PANTHER B3 DOMAIN-CONTAINING PROTEIN LOC_OS12G40080 5 195 - -
Mal1g4581 222 Gene3D - 3 107 IPR015300 -
Mal1g4581 222 MobiDBLite consensus disorder prediction 118 202 - -
Mal1g4581 222 Pfam B3 DNA binding domain 11 102 IPR003340 GO:0003677
Mal1g4581 222 SUPERFAMILY DNA-binding pseudobarrel domain 8 102 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4581 Mal-Chr1 107254336 107255259 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4581 8 175 REM Transcription Factor Family AT3G06220 29.070 2.05e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g4581 B3 3.1e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4581 - - mtr:MTR_3g088515 202.986