Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4570 ATGACTAACACTGGCAAGGAGTACCCTGACTTTTTCAAAGTCTTCCTCTCACAGAACCACTCAGAGAGAATGCTTATCCCAAATGCTTTTGTGAAGTTAATGCAATCAAAAAGACGGGTATTGAAGGATTTTATACTAAGAGATAAAAGAGGAAGTGATTGGCATGTCAAAGCGCGCCGTATTGGTGACGAGCTTTACTTTGACCATGGCTGGAAACAATTCAGAGAAGAAAACTGTTTAGAGGAAAATGACTTCCTTGTTTTCACACATATTGAAAACAATGTATTCAATTTCAAAATCCTTGAACTATCATCAATGTGTGAAAAGATAAAGGTATTGAATGAGGAAGAGGAAAATAATAATATGATGGAGGATGTGGATAAGGATGAGGAAGAGGATGGTGATGATGATGGTAGTGATGAGGACGAAGAAGAGGATGGTGGTAGTGATTATGAAGATGTGATGCCAGAGGAAGAACATGATGATGATGATGATGATGCTGATGAGGACGAAGACGAGTGTATCATGAAAGAAGAGAATGATGATGAGTGTATCATGAAAGAAGAGAATGACGATGTGTACAAGGAGTTTAGTAGAAGTGAACATCGACATTGTAGAACCTGCAAAGCATGGGACATTGGGAGCAGCTCTGCAGGATTAAACTTTGAAGATGATCATATTGATGCTGAAATGTACATTCAACCGGGAAATCCACACTTCATTGCAAAACATAATCGTTACAGACCCAACGAATTGCATTTTCCGAAGAATGTAATTAAGGATTTATGTGTTTGCTTCACAAAATATATCAAACTTGTATGTTGCGATTGCAAGTTGCATTTATCCTTTTTCTATGATAGGATATTCAATGCAATGAAATAG 882 0.3741 MTNTGKEYPDFFKVFLSQNHSERMLIPNAFVKLMQSKRRVLKDFILRDKRGSDWHVKARRIGDELYFDHGWKQFREENCLEENDFLVFTHIENNVFNFKILELSSMCEKIKVLNEEEENNNMMEDVDKDEEEDGDDDGSDEDEEEDGGSDYEDVMPEEEHDDDDDDADEDEDECIMKEENDDECIMKEENDDVYKEFSRSEHRHCRTCKAWDIGSSSAGLNFEDDHIDAEMYIQPGNPHFIAKHNRYRPNELHFPKNVIKDLCVCFTKYIKLVCCDCKLHLSFFYDRIFNAMK* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4570 293 ProSiteProfiles B3 DNA-binding domain profile. 9 104 IPR003340 GO:0003677
Mal1g4570 293 SUPERFAMILY DNA-binding pseudobarrel domain 7 102 IPR015300 -
Mal1g4570 293 MobiDBLite consensus disorder prediction 119 171 - -
Mal1g4570 293 CDD B3_DNA 9 101 IPR003340 GO:0003677
Mal1g4570 293 Pfam B3 DNA binding domain 11 100 IPR003340 GO:0003677
Mal1g4570 293 MobiDBLite consensus disorder prediction 115 171 - -
Mal1g4570 293 Gene3D - 3 107 IPR015300 -
Mal1g4570 293 Coils Coil 112 133 - -
Mal1g4570 293 PANTHER B3 DOMAIN-CONTAINING 2 266 - -
Mal1g4570 293 SMART B3_2 11 104 IPR003340 GO:0003677
Mal1g4570 293 PANTHER B3 DOMAIN-CONTAINING PROTEIN LOC_OS12G40080 2 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4570 Mal-Chr1 106476093 106477528 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4570 9 110 B3 DNA Binding Superfamily AT4G34400 34.314 3.03e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g4570 B3 8.9e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4570 - - mtr:MTR_1g046320 347.051