Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4567 ATGACTAACACTGGCAAGGAGTACCCTGACTTTTTCAAAGTCTTCCTCTCACAGAACCACTCAGAGAGAATGCTTATCCCAAATGCTTTTGTGAAGTTAATGCAATCAAAAAGACGGGTATTGAAGGATTTTATACTAAGAGATAAAAGAGGAAGTGATTGGCATGTCAAAGCGCGCCGTATTGGTGACGAGCTTTACTTTGACCATGGCTGGAAACAATTCAGAGAAGAAAACTGTTTAGAGGAAAATGACTTCCTTGTTTTCACACATATTGAAAACAATGTATTCAATTTCAAAATCCTTGAACTATCATCAATGTGTGAAAAGATAAAGGTATTGAATGAGGAAGAGGAAAATAATAATATGATGGAGGATGTGGATAAGGATGAGGAAGAGGATGGTGATGATGATGGTAGTGATGAGGACGAAGAAGAGGATGGTGGTAGTGATTATGAAGATGTGATGCCAGAGGAAGAACATGATGATGATGCTGATGAGGACGAAGACGATTGTATCATGAAAGAAGAGAATGATGATGAGTGTATCATGAAAGAAGAGAATGACGATGTGTACAAGGAGTTTAGTAGAAGTGAACATCGACATTGTAGAACCTGCAAAGCATGGGACATTGGGAGCAGCTCTGCAGGATTAAACTTTGAAGATGATCATATTGATGCTGAAATGTACATTCAACCGGGAAATCCACACTTCATTGCAAAACATAATCGTTACAGACCCAACGAATTGCATTTTCCGAAGAATGTAATTAAGGATTTATGTGTTTGCTTCACAAAATATATCAAACTTGTATGTTGCGATTGCAAGTTGCATTTATCCTTTTTCTATGATAGGATATTCAATGCAATGAAATAG 873 0.3734 MTNTGKEYPDFFKVFLSQNHSERMLIPNAFVKLMQSKRRVLKDFILRDKRGSDWHVKARRIGDELYFDHGWKQFREENCLEENDFLVFTHIENNVFNFKILELSSMCEKIKVLNEEEENNNMMEDVDKDEEEDGDDDGSDEDEEEDGGSDYEDVMPEEEHDDDADEDEDDCIMKEENDDECIMKEENDDVYKEFSRSEHRHCRTCKAWDIGSSSAGLNFEDDHIDAEMYIQPGNPHFIAKHNRYRPNELHFPKNVIKDLCVCFTKYIKLVCCDCKLHLSFFYDRIFNAMK* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4567 290 ProSiteProfiles B3 DNA-binding domain profile. 9 104 IPR003340 GO:0003677
Mal1g4567 290 SUPERFAMILY DNA-binding pseudobarrel domain 7 102 IPR015300 -
Mal1g4567 290 MobiDBLite consensus disorder prediction 119 170 - -
Mal1g4567 290 Pfam B3 DNA binding domain 11 100 IPR003340 GO:0003677
Mal1g4567 290 PANTHER B3 DOMAIN-CONTAINING PROTEIN LOC_OS12G40080 2 263 - -
Mal1g4567 290 CDD B3_DNA 9 101 IPR003340 GO:0003677
Mal1g4567 290 MobiDBLite consensus disorder prediction 115 170 - -
Mal1g4567 290 PANTHER B3 DOMAIN-CONTAINING 2 263 - -
Mal1g4567 290 Gene3D - 3 107 IPR015300 -
Mal1g4567 290 Coils Coil 112 133 - -
Mal1g4567 290 SMART B3_2 11 104 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4567 Mal-Chr1 106329728 106331154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4567 4 171 REM Transcription Factor Family AT3G06220 29.167 8.47e-14 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g4567 B3 8.7e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4567 - - mtr:MTR_1g046320 347.821