Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4565 ATGGATCACCGGCTTATTAAATCTAAAAATTTAGCAGTAATCGCCCATTCTGATCCATTAGAAATGAAAAGGGTCCTTACACTATATAAAGAATTTGAGGGAGTATCAACACTAGTTGATGTAGGAGGTGGAGTAGGGAATGCTTTGAAATTGATTATATCTGAATGTCCTTCAATAAAAGGTATCGATTTTTATTTGGCTCAAGTGATTCAAGATGCACCAACTCATCCTGGGATAGAACATGTTGAAGGAAATATTTTTGAAAGTGTTCCAACAGGTGATGCCATCTTAATAAAGCTTGTATGTCACAATTGGGCAGATGAAGATTTGTGA 333 0.3574 MDHRLIKSKNLAVIAHSDPLEMKRVLTLYKEFEGVSTLVDVGGGVGNALKLIISECPSIKGIDFYLAQVIQDAPTHPGIEHVEGNIFESVPTGDAILIKLVCHNWADEDL* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4565 110 Pfam O-methyltransferase domain 14 109 IPR001077 GO:0008171
Mal1g4565 110 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 109 IPR029063 -
Mal1g4565 110 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 110 IPR016461 GO:0008168
Mal1g4565 110 Gene3D Vaccinia Virus protein VP39 18 109 IPR029063 -
Mal1g4565 110 PANTHER O-METHYLTRANSFERASE 13 109 IPR016461 GO:0008168
Mal1g4565 110 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 13 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4565 Mal-Chr1 106177634 106178377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4565 2 108 Monolignol Biosynthesis Gene Families AT5G54160 55.140 5.31e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4565 K13066 - vun:114170340 144.05