Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4549 ATGGCTGCTCAACTCAATTATTTTGTTGGATCTCATGTTTGGGTTGAGGACCCTGATGAAGCCTGGATAGATGGAGAAATCCTTGAATCTAAAGATGATGAGATCACCATTAGCTTTGAATCAGGAACAAAGGTTGTGAGCAAATCAGCTAATATCTATCCAAAAGATCCTGAATTTCCTCCTAATGGTGTGGAAGATATGACAAGACTTGCATATCTGCATGAACCAGGAGTACTTCAGAATTTGCAAATTCGTTATACTGCCAATGAAATATATACATACACAGGAAACATATTGATAGCAGTAAACCCTTTTCAAAGGTTACCTCATTTGTATGCAAATAGTACAATGGCAAAGTATAAAGGTGCGGCTTTTGGTGAGCAGAGTCCACATCCTTTTGCAATTGCAGGTTATGCATATAGGAAGATGATAAATGAAGAAAAAAGCCAAGCTATTTTGGTTAGTGGAGAAAGTGGAGCTGGTAAAACAGAAAGTACAAAGATGCTTATGCACTACCTTGCATATTTGGGAGGAAGAGCAGCAACTGAGGGACGATCTGTGGAGCAACAAGTTCTTGAGTCCAATCCTGTTTTAGAAGCATTTGGGAATGCAAAGACAGTTAGGAATAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATGAAAAGGGGAGAATATCAGGAGCTGCTATCAGAACTTATTTGCTGGAACGATCACGTGTTTGTCAAGTTTCTGATCCCGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCACCAAAAGAGGATGTTGATAGATTCAAATTGGGAAATCCAAGAACGTTTCATTACCTCAATCAATCAAATTGCTATGAGCTTGATGCATTGGATGATTCTAAAGAGTATCTTGCAACTAGAAGAGCCATGGATGTTGTTGGAATCAGCTCTGATGAACAAGATGCTATATTTCGAATAGTAGCTGCTGTGCTTCATATAGGAAATGTTGAATTTGTTAAGGCAGTGGATGAAGGGATGGATTCCTCTAAACCTAAGGATGAAAGATCTTATTTCCATTTGAATACTGCAGCTGAACTTTTGATGTGTGATGAAAAGTCCCTAGAAGACTCGTTTTGCAAACGCGTTATGGTGACTCGTGGTGAGGCTATAACAAAATGGCTTGATCCAAATTCTGCAGCTCTCAGCAGAGATGCATTGGCTAAAATAGTTTATTCAAGGCTCTTTGACTGGATTGTGGACAAGATTAACAACTCTATTGGGCAAGATCCAACTTCAAAGAACTTAATTGGAGTTCTAGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAATTTGACAAATGAAAAGTTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTGATTGGAGTTATATAGAGTTCGTCGATAATCAAGATGTTCTTGATCTTATAGAGAAGAAACCAGGCGGTGTTATTGCTCTTCTGGATGAAGCCTGTATGTTTCCAAGATCAACGCACGAAACTTTTGCCGAAAAGCTATATCAAACACTTAAGGACAATAAACGCTTCAGCAAGCCAAAGTTGTCGCGAACTGATTTCACCATCAATCACTATGCTGGTGATGTCACTTATCAAACTGAACTTTTCCTCGATAAAAACAAAGATTATGTTGTTCCGGAGCATGCTGCGCTACTATGTGCTTCCAAGTGCCCCTTTGTTTCAGGACTTTTCCCACCTTTACCTGACGAAACTACTAAATCAACAAAGTTCTCTTCTATAGCCACTCAGTTTAAGCAACAACTTCAATCTTTGCTTGAAACATTGAATGCCACTGAGCCACACTACATTCGTTGCGTAAAGCCAAATAATCTTCTTAAGCCAGGGATATTCGAGAACAACGATGTGTTGCAGCAGCTTCGATGTGGGGGAGTAATGGAGGCAATTAGGATAAGTTGCGCTGGATATCCCACTAGAAAAGACTTCGATGAATTTGTGCAGCGGTTTAGTATATTGGAACCTAAGGTTCTAAAATCATGCCCTGATGAGATAACTGCTTGCAAGAGGCTTCTAGATAGAGCAAACCTTAAAGATTACCAGATTGGAAAGACAAAAGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGATGCATGTCGTGCCGAGGTCCTAGGAAGATCCGCAATCGTTATTCAGAAAAAAGCTCGCACGTTTATTTGTGAGAAACAGTACAAGATATTGCGATTCTCTGCCATAGAACTACAAAGGGCAGTCAGAGGACAACTTGCAAGGCATCAGTATGAATGCATGAGAAGGGATGCTGCATCTTTGATAATCCAGAAACAATTACGTATGCATCTTTCGAGAAGTGCTTATAAAACTACCTATGCCAAAGCTGTTTGCATTCAAGCTGGCATGCGAGCGATGACTGCTAGAAATGAACTCAGATTCAGGAAACGAACACGAGCTGCAACTGTTATTCAGGGCGACTATAGATGTTATTTAGCTCGTAATTATTTCCAAAGGCTAAAGAAATCAACGATTTCTGTACAATGTTCGTGGAGGAGGACAAGTGCACGAAGAGAACTTCGAAAGCTTAAAATGGCTGCTAAGGAATCCAAGGCTCTTGAAGCCGCAAAAATTAATCTAGAAAAGCAAGTTGAGGAACTAACTTTGTGTCTAGAATCAGAAAAGAGAATGAGGGAAGCCAAGACACAGGAAAATGAAAAATTACAATGTGCTTTGGAAGAGATGGAGGCGAAACTCATTCAGGAACGTGAGGCGGCGAAGAAAGTAGCTGAGCAAACTCCAACTTTACTGGGAAATAATGTTTCTGATAATGAATTGATTGATAAGCTTACGGAAGAAAATGAAAAACTCAAGGAGCTTGTTAATTCATTGGAAAAGAAAACTAAACTGGAGCTTCCTGATAATCTTACTGACAATGAAGTGATTAATAAGCTTGCCGAAGAAAATGAACAACTCAAAGAGAGGGTTAATTCATTGGAAAGGAAAACTATACAGGAGATTCCTGCTAATTTTACTGACAATGAAGTGATTAACAAGCTCGCCGAAGAAAAGGAACATTTTAAGGATCTGGTTAATTCATTGGAAAAGAAAATTGATGAGACAGAGAAAAAATATGAAGAAAGTAGCAAGCTTAGTGAGGAGCGTATGAATCAAATTATAGAGACAGAATCAAGAATGATTGAGCTAAAGACAAATATGCAGAGGCTTGAAGAAAAACTTTCTGATATGGAAACCGAGAATCAAATTTTTCGGAAGCAAGCGCTGTTGACTTCATCATCGAAGAGAATGTCAGCAAAGTTAACACCTGCTGCGATTCCGCCTTTGGAAAATGGTCATCAGGCACCGGCAAAATTACTTGCTTCAGAATCTGTGAGGAGATCTCATATGGAGAGACATCAAGAAAGTGTAGATGCTCTTTTCAAATGTGTGACAAAAGATCTTGGATTCACTGAAGGGAAACCTGTTGCAGCATTTACCCTTTATAATTGTTTGCTACATTGGAAATCTTTTGAAGCAGATAAGACAAGTATATTTGATCGTCTTATTATGCTCATTGGTTCTGCGATAGAGGATCAGGATAATAACAGCAGTATGGCTTATTGGTTGTCCAATACATCTGCTTTGTTTTTCCACCTTCAACGATGTCTAAGAGTACCAGCACGAAAACCACCCACTCCAACAGGGTTTTTTGGGAGGATGACCCAGGGTTTCCGCTCATCCAATAGTCTTTCCAGTAGTGCATTTGATGTAGTACAACAAGTTGATGCAAAGTATCCAGCTTTGCTTTTCAAGCAACAGCTCGCAGCTTATGTGGAAAAGATATATGGAATCGTTCGAGAAAATATGAAAAAAGATTTGGCCCCTCTTATTTCTTCTTGCATCGAGGAGCACAGAACACGAAACGACAACAGCCCACCAGCTGGTTCATGGCTCAACATTATTGAATGCCTAAATAGATTTCTCAAGATTCTAAAAGAAAATTATGTGCCTCACGTTCTAATTCAAAAGGTATTTAATCAGACTTTCCAATACATCAATGCAGAAATATTTAACAGCCTTCTATTGCATAAAGAATGCTGCACATTCAACAATGGAGAATATGTAAAAACAGGGTTAGCTGAACTAGAACTATGGTGTACCGAAGCAACGGAAGAGTTTGCTGGCTCGTCGTTGGATGAACTCAACCATGCAAAACAAGCAGTTAGATTCTTGATTGCTCAAGAGAAGAATGAACTATCCTATGATGATCTTACAAATGACATTTGTCCTGTCCTAAGTTCTCAACAGCTTTATAGAATATGTACACTATACTTGGATGAAAATGATAACACCAAAAGTGTATCATCAGATGTCACTTCTAGATTAAAGCTGCTAATAACAGATGATGCAGGTGATGATGACAAATACTTCTTGTTGGAAGACAATTCGAGTCTTCCAATTATTGTTGAAGAGATTTCTCATTCTCAACAAGATAAGACAGTTCCAAAAGTAAAACCTCCTGAAGAACTTCTTGAGAATGCAGCCTTCCAATTTTTACATGATTATTCTTAG 4620 0.3868 MAAQLNYFVGSHVWVEDPDEAWIDGEILESKDDEITISFESGTKVVSKSANIYPKDPEFPPNGVEDMTRLAYLHEPGVLQNLQIRYTANEIYTYTGNILIAVNPFQRLPHLYANSTMAKYKGAAFGEQSPHPFAIAGYAYRKMINEEKSQAILVSGESGAGKTESTKMLMHYLAYLGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDEKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDVDRFKLGNPRTFHYLNQSNCYELDALDDSKEYLATRRAMDVVGISSDEQDAIFRIVAAVLHIGNVEFVKAVDEGMDSSKPKDERSYFHLNTAAELLMCDEKSLEDSFCKRVMVTRGEAITKWLDPNSAALSRDALAKIVYSRLFDWIVDKINNSIGQDPTSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAEKLYQTLKDNKRFSKPKLSRTDFTINHYAGDVTYQTELFLDKNKDYVVPEHAALLCASKCPFVSGLFPPLPDETTKSTKFSSIATQFKQQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNDVLQQLRCGGVMEAIRISCAGYPTRKDFDEFVQRFSILEPKVLKSCPDEITACKRLLDRANLKDYQIGKTKVFLRAGQMAELDACRAEVLGRSAIVIQKKARTFICEKQYKILRFSAIELQRAVRGQLARHQYECMRRDAASLIIQKQLRMHLSRSAYKTTYAKAVCIQAGMRAMTARNELRFRKRTRAATVIQGDYRCYLARNYFQRLKKSTISVQCSWRRTSARRELRKLKMAAKESKALEAAKINLEKQVEELTLCLESEKRMREAKTQENEKLQCALEEMEAKLIQEREAAKKVAEQTPTLLGNNVSDNELIDKLTEENEKLKELVNSLEKKTKLELPDNLTDNEVINKLAEENEQLKERVNSLERKTIQEIPANFTDNEVINKLAEEKEHFKDLVNSLEKKIDETEKKYEESSKLSEERMNQIIETESRMIELKTNMQRLEEKLSDMETENQIFRKQALLTSSSKRMSAKLTPAAIPPLENGHQAPAKLLASESVRRSHMERHQESVDALFKCVTKDLGFTEGKPVAAFTLYNCLLHWKSFEADKTSIFDRLIMLIGSAIEDQDNNSSMAYWLSNTSALFFHLQRCLRVPARKPPTPTGFFGRMTQGFRSSNSLSSSAFDVVQQVDAKYPALLFKQQLAAYVEKIYGIVRENMKKDLAPLISSCIEEHRTRNDNSPPAGSWLNIIECLNRFLKILKENYVPHVLIQKVFNQTFQYINAEIFNSLLLHKECCTFNNGEYVKTGLAELELWCTEATEEFAGSSLDELNHAKQAVRFLIAQEKNELSYDDLTNDICPVLSSQQLYRICTLYLDENDNTKSVSSDVTSRLKLLITDDAGDDDKYFLLEDNSSLPIIVEEISHSQQDKTVPKVKPPEELLENAAFQFLHDYS* 1540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4549 1539 Coils Coil 1033 1067 - -
Mal1g4549 1539 Pfam IQ calmodulin-binding motif 788 806 IPR000048 GO:0005515
Mal1g4549 1539 Pfam IQ calmodulin-binding motif 763 780 IPR000048 GO:0005515
Mal1g4549 1539 Pfam IQ calmodulin-binding motif 834 854 IPR000048 GO:0005515
Mal1g4549 1539 ProSiteProfiles IQ motif profile. 785 811 IPR000048 GO:0005515
Mal1g4549 1539 PANTHER MYOSIN 1019 1536 - -
Mal1g4549 1539 PANTHER MYOSIN 5 942 - -
Mal1g4549 1539 Coils Coil 879 902 - -
Mal1g4549 1539 CDD MyosinXI_CBD 1153 1506 IPR037975 GO:0007015
Mal1g4549 1539 Pfam DIL domain 1360 1462 IPR002710 -
Mal1g4549 1539 Pfam Myosin head (motor domain) 64 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g4549 1539 Gene3D - 11 55 IPR008989 GO:0003774|GO:0005524|GO:0051015
Mal1g4549 1539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 788 884 IPR027417 -
Mal1g4549 1539 ProSiteProfiles Dilute domain profile. 1202 1484 IPR002710 -
Mal1g4549 1539 PANTHER MYOSIN HEAVY CHAIN 1019 1536 - -
Mal1g4549 1539 SMART MYSc_2a 56 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g4549 1539 Coils Coil 1075 1109 - -
Mal1g4549 1539 Gene3D - 441 625 - -
Mal1g4549 1539 Pfam Myosin N-terminal SH3-like domain 10 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mal1g4549 1539 Coils Coil 991 1018 - -
Mal1g4549 1539 ProSiteProfiles IQ motif profile. 833 862 IPR000048 GO:0005515
Mal1g4549 1539 Gene3D Myosin VI head, motor domain, U50 subdomain 312 603 - -
Mal1g4549 1539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 787 IPR027417 -
Mal1g4549 1539 Gene3D - 252 310 - -
Mal1g4549 1539 Gene3D - 669 732 - -
Mal1g4549 1539 Gene3D - 787 834 - -
Mal1g4549 1539 Gene3D - 737 786 - -
Mal1g4549 1539 Gene3D - 835 884 - -
Mal1g4549 1539 SMART DIL_2 1359 1466 IPR002710 -
Mal1g4549 1539 ProSiteProfiles IQ motif profile. 810 837 IPR000048 GO:0005515
Mal1g4549 1539 PANTHER MYOSIN HEAVY CHAIN 5 942 - -
Mal1g4549 1539 Coils Coil 956 986 - -
Mal1g4549 1539 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Mal1g4549 1539 SMART iq_5 736 758 IPR000048 GO:0005515
Mal1g4549 1539 SMART iq_5 784 806 IPR000048 GO:0005515
Mal1g4549 1539 SMART iq_5 807 829 IPR000048 GO:0005515
Mal1g4549 1539 SMART iq_5 832 854 IPR000048 GO:0005515
Mal1g4549 1539 SMART iq_5 759 781 IPR000048 GO:0005515
Mal1g4549 1539 SMART iq_5 855 877 IPR000048 GO:0005515
Mal1g4549 1539 ProSiteProfiles Myosin motor domain profile. 62 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g4549 1539 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Mal1g4549 1539 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g4549 1539 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g4549 1539 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g4549 1539 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g4549 1539 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g4549 1539 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mal1g4549 1539 CDD MYSc_Myo11 76 722 IPR036018 -
Mal1g4549 1539 Coils Coil 907 948 - -
Mal1g4549 1539 Gene3D Kinesin motor domain 65 664 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4549 Mal-Chr1 105586880 105602202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4549 1 1536 Myosins gene family AT5G43900 61.377 0.0 1913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4549 K10357 - gmx:100788123 2446