Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4508 ATGTCTAACCACAACGAAACAACAACAATTAACACCGCTGCTTCAACCGATTTAGAACCCACTTCTCAAAACGCTATAACAGTAAAAAAACCGCCGTCAAAAGACCGTCACAGTAAAGTAGACGGAAGAGGAAGAAGAATAAGAATGCCAATAATCTGCGCCGCACGTGTCTTCCAGCTCACACGTGAGTTAGGTCATAAATCCGACGGTCAAACTATCGAATGGCTTCTCCGACAAGCTGAACCGTCGATCATCGCCGCCACCGGTACCGGAACTACTCCCGCTTCTTTCTCTTCGCTTTCTGAGCATAAACCTTTTCTTCAACCTTCTCCGTTTATCCTTGGGAAACGGTTAAGGGATGATGATGGTGATGCTGTTTCGGTTGCGGCACCTACTGCTCCGCCTGGGATGTGGCGGCCGGATTTTGCTCAGCTTTGGAGCTTTGCTGCTGCTGCTCAACCGCCGCCGGAAGGTTTTTCTGTTTCTTCGCATCAGCATAATTCTTTGTTTCATCATCAACAGCAACAACAGCAGCACCAGCAGCATCAACAGCAAGGTTCTATGGGTGAAGCTTCGGCGGCGAGGTTAGGGAATTATCTTCCTGGACATTTGAATTTGTTGGCTTCGTTGTCTGGTGGGAATGGAAATTCTGGTCGGGGAGATGATGAAGATCGTTGA 678 0.4823 MSNHNETTTINTAASTDLEPTSQNAITVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSEHKPFLQPSPFILGKRLRDDDGDAVSVAAPTAPPGMWRPDFAQLWSFAAAAQPPPEGFSVSSHQHNSLFHHQQQQQQHQQHQQQGSMGEASAARLGNYLPGHLNLLASLSGGNGNSGRGDDEDR* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4508 225 MobiDBLite consensus disorder prediction 158 191 - -
Mal1g4508 225 Pfam TCP family transcription factor 33 184 IPR017887 -
Mal1g4508 225 MobiDBLite consensus disorder prediction 154 191 - -
Mal1g4508 225 MobiDBLite consensus disorder prediction 1 42 - -
Mal1g4508 225 PANTHER TRANSCRIPTION FACTOR TCP21-RELATED 1 221 - -
Mal1g4508 225 ProSiteProfiles TCP domain profile. 33 87 IPR017887 -
Mal1g4508 225 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 221 IPR005333 GO:0003700
Mal1g4508 225 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4508 Mal-Chr1 104520742 104521419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4508 23 225 TCP Transcription Factor Family AT5G23280 60.345 2.48e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal1g4508 TCP 4.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4508 K16221 - gmx:100786264 243.047