Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4492 ATGGATTCGCTTGAACCACAACAACCACAACCTCACCCACACCACCTTCATCTGGAAAATATTGTGCTAGTGGATCCCAATCCATTCACAAACATTGTTCCAACCACCCTGATGGAACCGAGCACTGCTCAACTCCATCAATTAAATATGAACACTAACCAACCTTCTCATTTTGAACCTTTCAATAACAATAATGTTATTTCTACCTTGAATCCATGTGTGGGTGCTTCCTCTGGATCTGGTTCAATCAAGAAAAAAAGAGGTCGATCGAGGAAGTACTTTACATATGACAATATTGCTTTCTTCTTGGACTCATGTCATGATGCTACCATTACTTCTCCTTCTTCTTCCACTACGAAGAAGAATACACGGGGAAGAGGAAGGCCACGTGGCTCTTTGAACAAGAAGAAGAAAGTTCAAAAGCCGGGAGTTACTGGATCTGGTTTTTGCCCATATATGATCACTGTGAACCCTGGAGAGAACATTGTTGCGAAACTTAAGACTTGTTGTCAGGGAGGACCTAATACTGATATGTGCATTCTTTCTGCTCACGGTTTAGTTGGAACTTTCTCCCTTCATCAGACAGGAAGCATTGTTACTTATGAGGGTCAATTTGAGCTTGTATCCATGTCAGGAATGTTAGAAGTATTTGACAATAATAAGGGTTCTAAAAGAATGAGTAACTTTAAGGTAACTCTAGTGGATCCCGATTCACACCTTTTGGGAGGTGAAGTTGCTGATACGCTTATTGCGGCATCGTCAGTAAAGGTCACAGTGGGTAGTTTTGCTTTGGATGGAAAAAAGGGTAGCTCAAATAACCTTAAAATTGGGTCTTCTTCGGTGCCATCATCCCAATTTGATACTTCAGAGACTTCAACTAGTGCTACCTTTCAAGGGCCTTCATATAAGTTCCATGGTAACAATAAGAATAGTCCATGTAATCAGAGGCTTGGAATCTATAATAATGATAGTAATCCCATTCCTACTATTTTGGCATTCCATCAAATGTTGGCTCACCAAAAACAACAGTGA 1032 0.405 MDSLEPQQPQPHPHHLHLENIVLVDPNPFTNIVPTTLMEPSTAQLHQLNMNTNQPSHFEPFNNNNVISTLNPCVGASSGSGSIKKKRGRSRKYFTYDNIAFFLDSCHDATITSPSSSTTKKNTRGRGRPRGSLNKKKKVQKPGVTGSGFCPYMITVNPGENIVAKLKTCCQGGPNTDMCILSAHGLVGTFSLHQTGSIVTYEGQFELVSMSGMLEVFDNNKGSKRMSNFKVTLVDPDSHLLGGEVADTLIAASSVKVTVGSFALDGKKGSSNNLKIGSSSVPSSQFDTSETSTSATFQGPSYKFHGNNKNSPCNQRLGIYNNDSNPIPTILAFHQMLAHQKQQ* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4492 343 MobiDBLite consensus disorder prediction 123 137 - -
Mal1g4492 343 ProSiteProfiles PPC domain profile profile. 146 284 IPR005175 -
Mal1g4492 343 MobiDBLite consensus disorder prediction 275 308 - -
Mal1g4492 343 MobiDBLite consensus disorder prediction 112 142 - -
Mal1g4492 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 151 262 IPR005175 -
Mal1g4492 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 32 307 - -
Mal1g4492 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 32 307 IPR039605 GO:0003680
Mal1g4492 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 149 262 - -
Mal1g4492 343 Gene3D - 151 278 - -
Mal1g4492 343 CDD DUF296 151 262 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4492 Mal-Chr1 104152558 104155763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4492 42 268 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 37.553 2.26e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4492 - - mtr:MTR_1g038990 381.719