Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4491 ATGGATTCTCTTGAACCACAACCACCACAACCTCACCCACACCACCTTCATCTGGAAAATATTGTGCTAGTGGATCCCAATCCATTCACAAACATTGTTCCAACCACCCTGATGGAACCGAGCACTGCTCAACTCCATCAATTCAATATGAACACTAACCAACCCTCTCATTTTGAACCCTTCAATAACAATAATGTTCTTTCTACCTTGAATCCATGTGTGGGTGCTTCCTCTGGATCTGGTTCAATCAAGAAAAAAAGAGGTCGATCGAGGAAGTACTTTACATATGACAACATTGCTTTCTTCTTGGACTCATGTCATGATGCTACCATTACTTCTCCTTCTTCTTCCACTACGAAGAAGAATACACGGGGAAGAGGAAGGCCACGTGGCTCTTTGAACAAGAAGAAGAAAGTTCAAAAGCCGGGAGTTACTGGATCTGGTTTTTGCCCATATTTGATCACTGTGAACCCTGGAGAGAACATTGTTGCGAAACTTAAGACTTGTTGTCAGGGAAGACCTAATACTGATATGTGCATTCTTTCTGCTCACGGTTTAGGTCAATTTGAGCTTGTATCCATGTCAGGAATGTTAGAAGTATTTGACAATAATAAGGGTTCTAAAAGAATGAGTAACTTTAAGGTAACTCTAGTGGATCCCGATTCACACCTTTTGGGAGGTGAAGTTGCTGATACGCTTATTGCGGCATCGTCAGTAAAGGTCACAGTGGGTAGTTTTGCTTTGGATGGAAAAAAGGGTAGCTCAAATAACCTTAAAATTGGGTCTTCTTCGGTGCCATCATCCCAATTTGATACTTCAGAGACTTCAACTGGTGCTACCTTTCAAGGGCCTTCATATAAGTTCCATGGTAACAATGAGAATAGTCCATGTAATCAGAGGCTTGGAATCTATAATAATGATAGTAATCCCATTCCTACTATTTTGGCATTCCATCAAATGTTGGCTCACCAAAAAGAACAATGA 984 0.4096 MDSLEPQPPQPHPHHLHLENIVLVDPNPFTNIVPTTLMEPSTAQLHQFNMNTNQPSHFEPFNNNNVLSTLNPCVGASSGSGSIKKKRGRSRKYFTYDNIAFFLDSCHDATITSPSSSTTKKNTRGRGRPRGSLNKKKKVQKPGVTGSGFCPYLITVNPGENIVAKLKTCCQGRPNTDMCILSAHGLGQFELVSMSGMLEVFDNNKGSKRMSNFKVTLVDPDSHLLGGEVADTLIAASSVKVTVGSFALDGKKGSSNNLKIGSSSVPSSQFDTSETSTGATFQGPSYKFHGNNENSPCNQRLGIYNNDSNPIPTILAFHQMLAHQKEQ* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4491 327 MobiDBLite consensus disorder prediction 123 137 - -
Mal1g4491 327 Gene3D - 186 262 - -
Mal1g4491 327 SUPERFAMILY AF0104/ALDC/Ptd012-like 149 246 - -
Mal1g4491 327 Pfam Plants and Prokaryotes Conserved (PCC) domain 151 246 IPR005175 -
Mal1g4491 327 MobiDBLite consensus disorder prediction 259 292 - -
Mal1g4491 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 187 291 IPR039605 GO:0003680
Mal1g4491 327 MobiDBLite consensus disorder prediction 112 142 - -
Mal1g4491 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 33 186 - -
Mal1g4491 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 186 IPR039605 GO:0003680
Mal1g4491 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 187 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4491 Mal-Chr1 104107460 104110466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4491 42 252 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 34.599 1.04e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4491 - - mtr:MTR_1g038990 349.747