Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4484 ATGGATTCGCTTGAACCACAACCACCACAACCTCACGCAAACCACCTTCATCTGGAAAATAATGTGCTAGTGGGTCCCAATCCATTCACAAATAGTGTTCTAACCACCCTGATGGAACCGACCACTGCTCAATTCCATCAATTCAAGATGAACACTAACCAACCCTCTCATTGTTCCTCTGGATCTGGTTGTTCCTCTGAGCCTTTCAACAACAAAAATGTTCCTTCTACCTTGAATCCATGTGTGGGTGCTTCCTCTGGATCTGGTTCAACCAAGAAAAAAAGAGGTCGACCTCTGAAGTATTTTATAGATGGAAACATTTCTTTCTTCTCAAACCCATCCCATGATGCTACCATTAGTTCTCCTTCTTCTTCTATTGAGAAGAAGAATGCAAGGGGAAGAGGAAGGCCTCGTGGCTCTTTGAACAAGAAGAAGCAAGTTCAAGTGCCGGGAGTTACTGGATCTGGTTTCTGCCCATATTTGATCACTGTGAACCCTGGAGAGAACATTGTTGCGAAACTTAAGACTTGTTGTCAGGGAGGACCTAATACTGATATGTGCATTCTTTTTGCTCAGGGTTTAGTTAGCATTGTCTCCCTTCATCAAACAGGACACGTTGTTACTTGTGAGGGCCAATTTGAGCTTCTATCCCTGTCAGGAATGTTAGAAGTATTTGACAATAATAAAGGTTCTAAAAGAATGAGTAACTTTAAGGCATCTCTAGTGGATCCCGATTCACGCCTTTTGGGAGGTGTAGTTGCTGATACGCTTATTGCGGCATCGTTAGTAAAGATTACAGTGGCTAGTTTTACTTTGGATGGCGAAAATGGTAGCTCAACTAACCTGGAAAATGGGTCTTCTTCAATGCCAGTATCCCAATTTGCTGCTTCCGGAACTTCAACTAGTGCTGCCATTCAAGGGCCTTCATATAAGTCCCATGGTAACAATGAGAACAGTCCTTGTAATCAGTGA 972 0.429 MDSLEPQPPQPHANHLHLENNVLVGPNPFTNSVLTTLMEPTTAQFHQFKMNTNQPSHCSSGSGCSSEPFNNKNVPSTLNPCVGASSGSGSTKKKRGRPLKYFIDGNISFFSNPSHDATISSPSSSIEKKNARGRGRPRGSLNKKKQVQVPGVTGSGFCPYLITVNPGENIVAKLKTCCQGGPNTDMCILFAQGLVSIVSLHQTGHVVTCEGQFELLSLSGMLEVFDNNKGSKRMSNFKASLVDPDSRLLGGVVADTLIAASLVKITVASFTLDGENGSSTNLENGSSSMPVSQFAASGTSTSAAIQGPSYKSHGNNENSPCNQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4484 323 Gene3D - 159 284 - -
Mal1g4484 323 SUPERFAMILY AF0104/ALDC/Ptd012-like 157 271 - -
Mal1g4484 323 MobiDBLite consensus disorder prediction 114 146 - -
Mal1g4484 323 MobiDBLite consensus disorder prediction 114 128 - -
Mal1g4484 323 ProSiteProfiles PPC domain profile profile. 154 292 IPR005175 -
Mal1g4484 323 MobiDBLite consensus disorder prediction 276 323 - -
Mal1g4484 323 Pfam Plants and Prokaryotes Conserved (PCC) domain 159 271 IPR005175 -
Mal1g4484 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 37 317 - -
Mal1g4484 323 CDD DUF296 159 270 IPR005175 -
Mal1g4484 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 37 317 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4484 Mal-Chr1 104027794 104031135 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4484 83 275 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 44.000 3.51e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4484 - - mtr:MTR_1g038990 356.295