Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4482 ATGGATTCGCTTGAACCACAACCACCACAACCTCACGCAGTCCACCTTCATCTGGAAAATAATGTGCTAGTGGGTCCCAATCCATTCACAAATAGTGTTCCAACCACCCTGATGGAACCGACCACTGCTCAATTCCATCAATTCAAGATGAACACTAACCAACCCTCTCATTGTTCCTCTGGATCTGGTTGTTCCTCTGAGCCTTTCAACAACAAAAATGTTCCTTCTACCTTGAATCCACATGGAAACATTTCTTTCTTCTCAAACCCATCCCATGATGCTACCATTAGTTCTCCTTCTTCTTCTATTGAGAAGAAGAATGCAAGGGGAAGAGGAAGGCCTCGTGGCTCTTTGAACAAGAAGAAGCAAGTTCAAGTGCCGGGAGTTACTGGATCTGGTTTCTGCCCATATTTGATCACTGTGAACCCTGGAGAGAACATTGTTGCGAAACTTAAGACTTGTTGTCAGGGAGGACCTAATACTGATATGTGCATTCTTTCTGCTCATGGTTTAGTTAGCATTGTCTCCCTTCATCAGACAGGACACATTGTTACTTGTGAGGGCCAATTTGAGCTTCTATCCCTGTCAGGAATGTTAGAAGTATTTGACAATAATAAAGGTTCTAAAAGAATGAGTAACTTTAAGGCATCTCTAGTGGATCGCGATTCACACCTTTTGGGAGGTGTAGTTGCTGATACGCTTATTGCGGCATCGTTAGTAAAGATTACAGTGGCTAGTTTTACTTTGGATTACGAAAATGGTAGCTCAAATAACCTGGAAAATGGGTCTTCTTCAATGCCACTATCCCAATTTGCTGCTTCCGGAACTTCAACTAGTGCTGTCATTCAAGGGCCTTCATATAAGTCCCATGGTAACAATGAGAACAGTCCTTGTAATAAGTGA 903 0.4252 MDSLEPQPPQPHAVHLHLENNVLVGPNPFTNSVPTTLMEPTTAQFHQFKMNTNQPSHCSSGSGCSSEPFNNKNVPSTLNPHGNISFFSNPSHDATISSPSSSIEKKNARGRGRPRGSLNKKKQVQVPGVTGSGFCPYLITVNPGENIVAKLKTCCQGGPNTDMCILSAHGLVSIVSLHQTGHIVTCEGQFELLSLSGMLEVFDNNKGSKRMSNFKASLVDRDSHLLGGVVADTLIAASLVKITVASFTLDYENGSSNNLENGSSSMPLSQFAASGTSTSAVIQGPSYKSHGNNENSPCNK* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4482 300 CDD DUF296 136 247 IPR005175 -
Mal1g4482 300 MobiDBLite consensus disorder prediction 51 123 - -
Mal1g4482 300 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 293 IPR039605 GO:0003680
Mal1g4482 300 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 248 IPR005175 -
Mal1g4482 300 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 33 293 - -
Mal1g4482 300 ProSiteProfiles PPC domain profile profile. 131 269 IPR005175 -
Mal1g4482 300 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 248 - -
Mal1g4482 300 MobiDBLite consensus disorder prediction 51 105 - -
Mal1g4482 300 Gene3D - 136 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4482 Mal-Chr1 103988563 103991999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4482 50 252 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 40.476 3.09e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4482 - - mtr:MTR_1g038990 321.627