Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4480 ATGGATTCGCTTGAACCACAACCACCACAACCTCACGCAGACCACCTTCATCTAGAAAATAATGTGCTAGTGGGTCCCAATCCATTCACAAATAGTGTTCCAACCACCCTGATGGAACCGACCACTGCTCAATTCCATCAATTCAAGATGAACACTAACCAACCCTCTCATTGTTCCTCTGGATCTGGTTGTTCCTCTGAGCCTTTCAACAACAAAAATGTTCCTTCTACCTTGAATCCATGTGTGGGTGCTTCCTCTGGATCTGGTTCAACCAAGAAAAAAAGAGGTCGACCTCTGAAGTATTTTATAGATGGAAACATTTCTTTCTTCTCAAACCCATCCCATGATGCTACCATTAGTTCTCCTTCTTCTTCTATTGAGAAGAAGAATGCAAGGGGAAGAGGAAGGCCTCGTGGCTCTTTGAACAAGAAGAAGCAAGTTCAAGTGCCGGGAGTTACTGAATCTGGTTTCTACCCATATTTGATCACTGTGAACCCTGGAGAGAACATTGTTGCGAAACTTAAGACTTGTTGTCAGGGAGGACCTAATACTGATATGTGCATTCTTTCTGCTCATGGTTTAGTTAGCATTGTCTCCCTTCATCAAACAGGACACATTGTTACTTGTGAGGGCCAATTTGAGCTTCTATCCCTGTCAGGAATGTTAGAAGTATTTGACAATAATAAAGGTTCTAAAAGAATGAGTAACTTTAAGGCATCTCTAGTGGATCGCGATTCACACCTTTTGGGAGGTGTAGTTGCTGATACGCTTATTGCGGCATCGTTAGTAAAGATTACAGTGGCTAGTTTTACTTTGGATTACAAAAATGGTAGCTCAAATAACCTGGAAAATTGGTCTTCTTCAATGCCACTATCCCAATTTGCTGCTTCCGGAACTTCAACTAGTGCTGCCATTCAAGGGCCTTCATATAAGTCCCATGGTAACAATGAGAACAGTCCTTGTGATCAGTGA 972 0.4218 MDSLEPQPPQPHADHLHLENNVLVGPNPFTNSVPTTLMEPTTAQFHQFKMNTNQPSHCSSGSGCSSEPFNNKNVPSTLNPCVGASSGSGSTKKKRGRPLKYFIDGNISFFSNPSHDATISSPSSSIEKKNARGRGRPRGSLNKKKQVQVPGVTESGFYPYLITVNPGENIVAKLKTCCQGGPNTDMCILSAHGLVSIVSLHQTGHIVTCEGQFELLSLSGMLEVFDNNKGSKRMSNFKASLVDRDSHLLGGVVADTLIAASLVKITVASFTLDYKNGSSNNLENWSSSMPLSQFAASGTSTSAAIQGPSYKSHGNNENSPCDQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4480 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 32 317 - -
Mal1g4480 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 32 317 IPR039605 GO:0003680
Mal1g4480 323 MobiDBLite consensus disorder prediction 114 128 - -
Mal1g4480 323 ProSiteProfiles PPC domain profile profile. 154 292 IPR005175 -
Mal1g4480 323 SUPERFAMILY AF0104/ALDC/Ptd012-like 156 271 - -
Mal1g4480 323 Pfam Plants and Prokaryotes Conserved (PCC) domain 159 271 IPR005175 -
Mal1g4480 323 MobiDBLite consensus disorder prediction 114 148 - -
Mal1g4480 323 Gene3D - 159 283 - -
Mal1g4480 323 MobiDBLite consensus disorder prediction 52 71 - -
Mal1g4480 323 CDD DUF296 159 270 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4480 Mal-Chr1 103940341 103943773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4480 83 273 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 42.929 1.96e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4480 - - mtr:MTR_1g038990 355.91