Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4475 ATGAAGCATTTACCAAAACCGTGTCTTCTTGTATTCTTTTGTGTGTTTACAATGATTGCATCACCTCATGCTGAGGCAAAACACCAAGGTAGCGAGGCAGATGCTTTGTTAAAATGGAAAGCAAGCTTTGACAACCAAAGCAAGGCTTTGCTTTCTTCATGGATTGGTAATAATCCATGCAATTGGGTGGGAGTTACATGGGTTGATAACTCACAATCTATTTACAAGGTAAATCTCACCGATATTGGATTAAAAGGTACGCTTCAAAGTCTCAATTTCTCATCACTTCCAAAACTCCATAGTTTAGTTTTAAGAAACAACTCATTCTATGGAGTTGTTCCACACCATATTGGAGTGATGTCTAATCTAAACATTCTTGATTTATCCAGTAATAAATTCTCTGGACTAATTCCACCTTCAATAGGTAATATAACTAATTTGGATACTGTTCTCCTTTATGAAAATGAATTCTCTGGACCAATTCCTTCCACTATCGGAAATTTGACCAAACTCACAAAACTATCACTTTTTGCAAATCACCTCAGTGGCAATATTCCTAAAGAAATGGAAAGCCTTACCAACTTGGAACTTTTGCAATTGAGCGATAATAATTTCATTGGTCATTTACCTCACAACGTTTGTGTTGGTGGAAAGTTGTCACATTTTTGTGCTACCATTAATCAGTTTACAGGTCGAGTTCCAAAGAGTTTGAAGAATTGCTCGAGCCTTAAGCGAGTCAGACTTGAACAAAATCAACTAACTGGAGATTTAGAAGATAGCTTTGGTGTGTATCCAAACTTAGACTATATGGGTTTGAGTAACAATAATTTTTATGGCCATCTTTCACCAAACTGGGGAAAGTGCAAGAATCTCACAAGCCTTAAAATATCCAATAATAATTTAACAGGGAGCATACCACCAGAATTGGCCGGGGCAACCAATTTACATATACTTGACTTGTCGTCAAATCAACTTATAGGAAATATTCCAAATGATCTAGGCGACTTATCTGCACTAATCCAACTCTCGATAAGTAATAATAATCTTTCGGGAGAAGTTCCTATACAAATTGCATCATTGCATGAACTAACTATGTTGGATCTTGCAACAAATAATTTAAGTGGCTTAATCCCAAAACAACTTGGAAGGTTGTCTATGTTATTGCACTTGAATTTGAGTCAAAATAAGTTTAAAGGAAACATTCCTGATGAGATTGGCCAATTAGAAGTTATTCAAAATCTTGATATTAGTGGAAATATTTTGGATGGAACCATACCAACAATGCTTGGTCAATTAAAATACTTAGAAACATTGAATGTCTCACATAATAATCTTTCTGGTACCATTCCCTTAAGTTCTGGTGAGATGTTAGGTTTGACTGTTGTTGACATATCATACAACCAATTGGAGGGTCCAATTCCAAGCATTCCAGCCTTCAAAAATGCTTCAATTGAAGCACTGAGAAATAACAAAGGTTTGTGTGGTAATGTCTCTGGCATAAAGCCTTGCTTAGCATCAGATGACAACTTGCATAATGATAAAAAGGCTAACAAAATTTTGGTGGTAGTTTTGCCCCTCACTCTAGGAACTTTATTGTTAGCTTTATTTATTTATTGGCTCTCACGTTGTCCCTTCCGAACTTCAATCGCGAGAGAATACAATCCTACAGAAGTAACTGAAGCTAAAAATCTATTTTCAATATGGAGTTTTGATGGCAAAATGGTGTATGAAAACATTGTAGAAGCCACAGAAGATTTTGACAACAAGTATCTCATTGGAGTAGGAGGACATGGAAGTGTTTATAGAGCAGAGTTGTCTACATGTCAAGTTGTAGCTGTGAAGAAACTCCATTCATTACAAAATGAAGAAATCTTCAATCTAAAAACTTTTGCAAGTGAGATCAAAGCTTTAACAAAAATCAAACACCGAAACATTGTGAAGTTATATGGGTTTTGCACACATTCACAACACTCATTTTTGGTTTATGAATTCTTGGAGAAAGGTAGTGTGGACAACATTTTGAAAGACGATGAACAAGCATTTTTATTTGACTGGAATAGGAGATTGAATGTCATAAAAGATGTTGCGAACGCTTTATGCTACATGCATCATAATTGCTCACCTTCAATTGTTCATCGCGATATATCCAGCAAGAATGTTGTTTTGGATTTAAAATATGTCGCTCATGTCTCAGACTTCGGAACGGCTAAGTTTCTTAATCCTGATTCATCCAACTGGACCTCTTTTATAGGCACTCTTGGATATTCTGCTCCAGAACTAGCATACACAATGGAAGTAAATGAGAAATGTGATGTGTATAGCTTTGGAGTATTAACCTTTGAAATACTTTTTGGAAAGCATCCGGGAGATATTTTATATTCTTCATTGCAATCAAGTGGTGTGGGTCTAACACTCGATGTCATGTCATTGATTGATATGTTAGATCAACGTCTCCCTCATCCTACAAATGTTATTTTGAAAGAGGTGGTATCAATTATAAAAATAACAATTGCTTGCTTAAATGAAAGCCCTCGTTGTCGCCCTACCATGGAAGATGTTTGCAAAGAGTTTGTGATATTAAATTCTTCTTGA 2592 0.3576 MKHLPKPCLLVFFCVFTMIASPHAEAKHQGSEADALLKWKASFDNQSKALLSSWIGNNPCNWVGVTWVDNSQSIYKVNLTDIGLKGTLQSLNFSSLPKLHSLVLRNNSFYGVVPHHIGVMSNLNILDLSSNKFSGLIPPSIGNITNLDTVLLYENEFSGPIPSTIGNLTKLTKLSLFANHLSGNIPKEMESLTNLELLQLSDNNFIGHLPHNVCVGGKLSHFCATINQFTGRVPKSLKNCSSLKRVRLEQNQLTGDLEDSFGVYPNLDYMGLSNNNFYGHLSPNWGKCKNLTSLKISNNNLTGSIPPELAGATNLHILDLSSNQLIGNIPNDLGDLSALIQLSISNNNLSGEVPIQIASLHELTMLDLATNNLSGLIPKQLGRLSMLLHLNLSQNKFKGNIPDEIGQLEVIQNLDISGNILDGTIPTMLGQLKYLETLNVSHNNLSGTIPLSSGEMLGLTVVDISYNQLEGPIPSIPAFKNASIEALRNNKGLCGNVSGIKPCLASDDNLHNDKKANKILVVVLPLTLGTLLLALFIYWLSRCPFRTSIAREYNPTEVTEAKNLFSIWSFDGKMVYENIVEATEDFDNKYLIGVGGHGSVYRAELSTCQVVAVKKLHSLQNEEIFNLKTFASEIKALTKIKHRNIVKLYGFCTHSQHSFLVYEFLEKGSVDNILKDDEQAFLFDWNRRLNVIKDVANALCYMHHNCSPSIVHRDISSKNVVLDLKYVAHVSDFGTAKFLNPDSSNWTSFIGTLGYSAPELAYTMEVNEKCDVYSFGVLTFEILFGKHPGDILYSSLQSSGVGLTLDVMSLIDMLDQRLPHPTNVILKEVVSIIKITIACLNESPRCRPTMEDVCKEFVILNSS* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4475 863 Gene3D Transferase(Phosphotransferase) domain 1 665 863 - -
Mal1g4475 863 Pfam Protein kinase domain 588 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4475 863 Pfam Leucine rich repeat 362 419 IPR001611 GO:0005515
Mal1g4475 863 Pfam Leucine rich repeat 265 325 IPR001611 GO:0005515
Mal1g4475 863 Gene3D Ribonuclease Inhibitor 214 504 IPR032675 -
Mal1g4475 863 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 148 - -
Mal1g4475 863 Gene3D Phosphorylase Kinase; domain 1 549 664 - -
Mal1g4475 863 SUPERFAMILY L domain-like 221 495 - -
Mal1g4475 863 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 148 - -
Mal1g4475 863 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 99 861 - -
Mal1g4475 863 SUPERFAMILY L domain-like 33 280 - -
Mal1g4475 863 SUPERFAMILY Protein kinase-like (PK-like) 567 857 IPR011009 -
Mal1g4475 863 ProSitePatterns Tyrosine protein kinases specific active-site signature. 710 722 IPR008266 GO:0004672|GO:0006468
Mal1g4475 863 ProSiteProfiles Protein kinase domain profile. 586 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4475 863 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 99 861 - -
Mal1g4475 863 Pfam Leucine Rich Repeat 122 143 IPR001611 GO:0005515
Mal1g4475 863 ProSitePatterns Protein kinases ATP-binding region signature. 592 615 IPR017441 GO:0005524
Mal1g4475 863 Gene3D Ribonuclease Inhibitor 146 213 IPR032675 -
Mal1g4475 863 Gene3D Ribonuclease Inhibitor 31 145 IPR032675 -
Mal1g4475 863 SMART LRR_typ_2 192 216 IPR003591 -
Mal1g4475 863 SMART LRR_typ_2 313 336 IPR003591 -
Mal1g4475 863 SMART LRR_typ_2 432 456 IPR003591 -
Mal1g4475 863 SMART LRR_typ_2 360 383 IPR003591 -
Mal1g4475 863 SMART LRR_typ_2 120 144 IPR003591 -
Mal1g4475 863 SMART LRR_typ_2 384 408 IPR003591 -
Mal1g4475 863 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4475 Mal-Chr1 103848358 103851071 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4475 84 758 Receptor kinase-like Gene Family AT4G08850 43.425 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal1g4475 Pkinase 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4475 - - mtr:MTR_0365s0020 1217.6