Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4471 ATGAAGCTTTTACCAATGCATTGTGTTTTTCTGTTCTTTTCTGTGTTTGTAATGGTTGCATCACCTCATGCTGCAGCAAAAATCAAAGGCAATGAGGCAAATGCTCTATTAAAATGGAAAGCAAGCTTTGACAACCAAAGCAAGGATTTGCTTTCTTCATGGATTGGTAATAATCCTTGCAATTGGGTGGGAATCACATGTGATGATAACTCACAATCTATTTACCAGGTAAATCTCACCGATATTGGACTAAAAGGTACGCTTCAAAGTCTCAATTTCTCATCACTTCCAAAACTCCATAGTTTAGTTTTAAGAAACAACTCATTCTATGGAGTTGTTCCACACCATATTGGAGTGATGTCTAATCTAAACTTTCTTGATTTGTCTAGTAATAACCTCTCTGGACTAATTCCACCTTCAATAGGTAATTTAACTAATTTGGATACTATTCTCCTTTATGCAAACAATATCAATGGAAGCATTCCAAATAGCATTGGTAATCTTTCAAAACTCTTATACATTGATCTTAGTGAAAATAATATCTCTGGAACTATACCAAAATCAATAGGAATGTTGGTTAAAATGTCAAATCTCAAGTTACATTCCAATCAACTTTTTGGCTATATTCCTCGTGAAATTGGGAATTTGGTCAACCTTTGGAGACTATATCTTGGAAATAACAGCCTTTCTGGCTATATTCCTCGAGAAATTGGATTTCTAAAACAACTCGGTGAACTTGATTTATCTGATAACTATCTCTCTGGCACAATCCCTTCTTCAATTGGAAACTTGAGCAATTTATATCATCTTTACCTTTATGGAAACAATATCATTGGAAGCATTCCCGATGAAGTTGGAAAGCTAAATTCCCTTACCATAATCCAGTTGTCAGGAAACAACCTCTGTGGACCAATTCCATCCACTATCGGAAATTTAACAAAAGTGAGTTCATTAACTCTTGACTCAAATGCTCTCATTGGACAAATTCCTTCCAATATTGGAAATTTGACAAAACTGGAAGAATTATCTCTTTTCTCAAATGCCCTCACTGGAAATATTCCAACAGAAATGAATAGGCTTGTCAATTTGGAAAGTCTGCAATTACCTTATAATAATTTCACAGGTCATTTACCTCACAACATTTGTGTTGGTGGAAACTTAAAACAATTCTCCGCCAGCAATAACCAATTCACAGGCCCAATTCCAAAGAGTTTGAAGAATTTCTCTAGCCTTATAAGAGTAAGGCTTCAAAAAAATCAACTAACTGACAATATAACTGATGCCTTTGGCGTGTATCCAAATTTGGACTACATGGAATTGAGTGATAATAATTTGTATGGTCATTTATCACCAAATTGGGGTAAGTGCAAGAATCTCACAAGCCTTAAAATCTCCAACAATAATTTATCAGGAAGTATTCCACCAGAATTGGCTGAGGCAACCAATTTACATATACTTGACTTGTCCTCAAACCAACTTACAGGAGAAATTCCAAAGGATCTAGGAAACTTATCTTCATTGATCCAACTCTCGATAAGTAATAATCATTTTTCAGGAGAAATTCCTGTACAGATTGCAACACTACAGGAACTAATTGCCTTGGAGCTTGCAAAAAATAATTTAAGTGGCTTCATCCCTAAAAGGCTTGGAAGGTTGTCAGAGGTAATACAGTTGAATTTGAGCCAAAATAGGTTTGAAGGAAACATTCCCGTTGAGTTCGGTCAATTGAATGTTATTGAAAATCTTGATCTAAGTGGAAATTTTTTAAATGGAACCATACCAGCAATGCTTGGACAGTTAAATCACCTAGAAACATTGAATCTTTCACATAATAATTTTTCTGGTAATATTCCCTTTAGCAATGGTGATATGTTAAGTTTGACAACTGTTGATATATCATACAATCAGTTGGAGGGTCCGATTCCAAGCATTCCAGCCTTCGAAAAATCAAATATTGAAGAACTGAGAAACAACAAAGACTTGTGTGGTAATGCTTCTAGCCTTAAGCTTTGTCCAACATGGAGTGCAAACTGCCATACTCATAAGACTAACAAAAAATTGGTGGTAGTTTTACCCGTCATTCTAGGCATTGTTTTGTTAGCATTATTTGTTTATGGACTAAAATATCTATGTCGAACTTCAAACACAAAAGAATGCAAGGTTGGAGATGAATCACACACTGATAATCTATTTTCAATATGGAGTTTTGATGGCAAGATGGTGTATGAGAACATTATTGAAGCCACAGAAGAGTTTGACAACAAGCATCTCATTGGGGTTGGAGGACAAGGAAATGTTTACAAAGCAAATTTGCCTACAGGACAAGTTGTAGCTGTGAAGAAGCTCCATTCATTACCAAATGGAGAAATGTCCAATCTGAAAGCTTTTGCAAGTGAGATAAGAGCTTTAACAGAAATCCGACATCGAAACATTGTGAAGTTATATGGATATTGTTCACATCGACTGTACTCCTTTTTGGTTTATGAGTTCTTGGAGAAGGGTAGTCTGGACAAGATTTTGAAAGATGATGAACAAATAACTTTGTTTGATTGGAATAGGAGGGTGAATGTCATTAAAGATGTTGCTAATGCTTTATGTTATATGCATCAAGATTTCTCACCTTCAATTGTTCATCGTGATATATCCAGCAAGAATGTTATTTTGGATTTGGAATATGTGGCTCATGTCTCAGACTTTGGAACAGCTAAGTTTCTAAATCTCGATTCTTCCAACTGGACCTCTTTTGTAGCAACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAAGTAAATGAGAAGTGTGATGTATATAGTTTTGGAGTATTAACCTTGGAAATACTTTTTGGAAAGCATCCTGGAGACATTGTATCTACGTTGTTGCAATCAAGTAGTGTCGGCCTGACAATTGATCCTATGTTGTTGACTGATAAGTTGGATCAACGTCTTCCTTGTCCTACTAATAATATCTGGAAAGAGGTGGTATTAATTATGAGGATTGCAATTCATTGCTTAAGTGAAAGACCACATAGTCGCCCTACAATGGATCAAGTTTGTAAGGAGATTGTAATGTCAAAGTGA 3084 0.3564 MKLLPMHCVFLFFSVFVMVASPHAAAKIKGNEANALLKWKASFDNQSKDLLSSWIGNNPCNWVGITCDDNSQSIYQVNLTDIGLKGTLQSLNFSSLPKLHSLVLRNNSFYGVVPHHIGVMSNLNFLDLSSNNLSGLIPPSIGNLTNLDTILLYANNINGSIPNSIGNLSKLLYIDLSENNISGTIPKSIGMLVKMSNLKLHSNQLFGYIPREIGNLVNLWRLYLGNNSLSGYIPREIGFLKQLGELDLSDNYLSGTIPSSIGNLSNLYHLYLYGNNIIGSIPDEVGKLNSLTIIQLSGNNLCGPIPSTIGNLTKVSSLTLDSNALIGQIPSNIGNLTKLEELSLFSNALTGNIPTEMNRLVNLESLQLPYNNFTGHLPHNICVGGNLKQFSASNNQFTGPIPKSLKNFSSLIRVRLQKNQLTDNITDAFGVYPNLDYMELSDNNLYGHLSPNWGKCKNLTSLKISNNNLSGSIPPELAEATNLHILDLSSNQLTGEIPKDLGNLSSLIQLSISNNHFSGEIPVQIATLQELIALELAKNNLSGFIPKRLGRLSEVIQLNLSQNRFEGNIPVEFGQLNVIENLDLSGNFLNGTIPAMLGQLNHLETLNLSHNNFSGNIPFSNGDMLSLTTVDISYNQLEGPIPSIPAFEKSNIEELRNNKDLCGNASSLKLCPTWSANCHTHKTNKKLVVVLPVILGIVLLALFVYGLKYLCRTSNTKECKVGDESHTDNLFSIWSFDGKMVYENIIEATEEFDNKHLIGVGGQGNVYKANLPTGQVVAVKKLHSLPNGEMSNLKAFASEIRALTEIRHRNIVKLYGYCSHRLYSFLVYEFLEKGSLDKILKDDEQITLFDWNRRVNVIKDVANALCYMHQDFSPSIVHRDISSKNVILDLEYVAHVSDFGTAKFLNLDSSNWTSFVATFGYAAPELAYTMEVNEKCDVYSFGVLTLEILFGKHPGDIVSTLLQSSSVGLTIDPMLLTDKLDQRLPCPTNNIWKEVVLIMRIAIHCLSERPHSRPTMDQVCKEIVMSK* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4471 1027 SUPERFAMILY RNI-like 328 655 - -
Mal1g4471 1027 ProSiteProfiles Leucine-rich repeat profile. 482 505 IPR001611 GO:0005515
Mal1g4471 1027 Gene3D Ribonuclease Inhibitor 360 673 IPR032675 -
Mal1g4471 1027 ProSitePatterns Tyrosine protein kinases specific active-site signature. 876 888 IPR008266 GO:0004672|GO:0006468
Mal1g4471 1027 SMART LRR_typ_2 481 504 IPR003591 -
Mal1g4471 1027 SMART LRR_typ_2 216 240 IPR003591 -
Mal1g4471 1027 SMART LRR_typ_2 168 192 IPR003591 -
Mal1g4471 1027 SMART LRR_typ_2 528 552 IPR003591 -
Mal1g4471 1027 SMART LRR_typ_2 264 288 IPR003591 -
Mal1g4471 1027 SMART LRR_typ_2 312 336 IPR003591 -
Mal1g4471 1027 SMART LRR_typ_2 600 621 IPR003591 -
Mal1g4471 1027 SMART LRR_typ_2 120 144 IPR003591 -
Mal1g4471 1027 SMART LRR_typ_2 360 384 IPR003591 -
Mal1g4471 1027 Gene3D Transferase(Phosphotransferase) domain 1 831 1027 - -
Mal1g4471 1027 Pfam Protein kinase domain 753 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4471 1027 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Mal1g4471 1027 PRINTS Leucine-rich repeat signature 480 493 - -
Mal1g4471 1027 PRINTS Leucine-rich repeat signature 123 136 - -
Mal1g4471 1027 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 150 276 - -
Mal1g4471 1027 SUPERFAMILY L domain-like 58 376 - -
Mal1g4471 1027 Gene3D Ribonuclease Inhibitor 29 190 IPR032675 -
Mal1g4471 1027 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 233 1026 - -
Mal1g4471 1027 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 157 - -
Mal1g4471 1027 Gene3D Ribonuclease Inhibitor 194 254 IPR032675 -
Mal1g4471 1027 SMART LRR_sd22_2 240 266 - -
Mal1g4471 1027 SMART LRR_sd22_2 480 506 - -
Mal1g4471 1027 SMART LRR_sd22_2 336 365 - -
Mal1g4471 1027 SMART LRR_sd22_2 144 170 - -
Mal1g4471 1027 SMART LRR_sd22_2 288 314 - -
Mal1g4471 1027 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 157 - -
Mal1g4471 1027 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 150 276 - -
Mal1g4471 1027 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 233 1026 - -
Mal1g4471 1027 SUPERFAMILY Protein kinase-like (PK-like) 733 1022 IPR011009 -
Mal1g4471 1027 Gene3D Phosphorylase Kinase; domain 1 714 830 - -
Mal1g4471 1027 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Mal1g4471 1027 Pfam Leucine rich repeat 242 301 IPR001611 GO:0005515
Mal1g4471 1027 Pfam Leucine rich repeat 458 517 IPR001611 GO:0005515
Mal1g4471 1027 Gene3D Ribonuclease Inhibitor 255 358 IPR032675 -
Mal1g4471 1027 ProSiteProfiles Protein kinase domain profile. 752 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4471 Mal-Chr1 103744127 103747346 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4471 15 924 Receptor kinase-like Gene Family AT4G08850 45.032 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal1g4471 Pkinase 9.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4471 - - gmx:100811066 1193.33