Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4446 ATGGAAGCAACATCAACTTGCTTCTTCTGTGGTAGAATCCCATCAAAATCCAAACTATCTTCATCTTCATCATTTGGATCATTTTGTTTACTAACACGCAACAATGTTACTACAATCATGTGCAAAACATCATTGAAAACACACAACCGTGTAATCCAAAGCATCACAAACAGCAATGAAACAAAGGTTCCAAGCACCACAAAAAGAAGAAGAAGGAGAAGAAAAAACGATGTAGCAATAGAAATTCAACTACCCTTTGAGAATATGAACAAGAATGTTCATGTGCATGAGAATATTGGTGACCCTATTGGATGGAAAGATGTTGGAAAAAGTGTTGTGAGTTGGATACGTGAGAGTATGAAAGCTATGGCTTTTGATATTGCTTCTGCTGAGTTACTTGAGGATTTGGAGTTTTCTGAGATGAAACAAAGAATGGGACCTGGTCTTACGTTTGTTATTCAAGCACAACCTTATTTGAATGCTGTTCCTATGCCTCTTGGTCTTGAAGTTACGTGTTTGAAAGCTTGTACTCATTATCCTACTCTCTTTGATCATTTTCAAAGAGAGTTGCGCGATGTTCTTCAAGATATGCAGAGTAAAGGTTTGGTTGAAGATTGGCGTGAAACTCAGTCTTGGAAATTGCTTAAGGAACTTGCTAATTCAGCTCAGCACAGGGCAGTTGCGAGGAAGATAACACAGCCAAAGAGTGTCCAAGGAGTTTTAGGATTGGACAGAGAAAGGGTCAAAGCAATACAACAAAGGATTGATGAATTCACCAAAAACATGTCTGAACTTCTCAATATTGAAAGGGATGTTGAATTGGAGTTTACTCAGGAGGAACTGGATGCTGTTCCTAAACCGGATGATGCTTCTGATCCATCGAAACCGATTGAATTCTTGGTTAGCCATAGCCAGCCTCAGCAAGAACTTTGTGACACCATTTGTAATTTAAATGCCATCAGTACCTCTACAGGATTGGGGGGAATGCATTTGGTGTTATTCAAGATTGAAGGAAACCATCGATTGCCACCTACTACTCTTTCACCCGGAGAAATGGTTTGTGTGAGAACGTGTGACAGCAAGGGTGCAGTTACAACTTCTTGTATGCAAGGAGTTGTGGAAAATCTTGGTGATGATGGCTATAGTATTACCGTTGCTTTAGAGTCACGCCATGGTGATCCTACTTTCTCTAAACTGTTTGGAAAGAATGTGCGCATTGATCGTATTCAAGGATTGGCTGATACGCTTACCTATGAGCGCAACTGTGAAGCCCTAATGCTGCTTCAGAAGAATGGTTTACAAAAGAAAAATCCATCAATTTCTGTTGTTGCAACTCTATTTGGCGAAGGGGAAGATGCTGCATGGCTTGAGAAGAATGGTTTGGTAGATTGGAAAGAAGAAAAAACAAATGGAGTATCAGGAAGTGAATCCTTTGATAAATCTCAGCAGAGAGCAATTGCGTTAGGTTTGAATAAGAAGAGGCCCCTATTGGTTATCCAAGGACCTCCTGGTACAGGAAAGACCGGTTTGCTCAAGCAACTAATAGCACGTGCCGTTGAACAAGGTGAAAAGGTTCTTGTTACAGCACCTACCAATGCAGCTGTTGATAATATGGTTGAAAAGCTTTCAAATGTTGGAATAAATATTGTTCGGGTTGGAAATCCCGCTCGTATATCAAAAACAGTAGCATCGAAGTCCTTAGGAGAAATTGTAAATGCGAAGCTTTCAAGTTTTCGCGAAGAGTGTGAGAGGAAGAAATCTGATCTAAGGAAAGATCTAAGACATTGTTTGAAGGATGATTCATTAGCTGCAGGCATACGCCAACTTCTGAAACAGTTGGCAAAGTCGCTAAAGAAAAAGGAAAAGGAGACTATAAATGAAGTTCTATCAAGTGCTCAGGTTGTGCTTGCCACAAATACCGGAGCAGCAGATCCTATGATTCGAAAGCTAAATGCTTTTGACTTGGTTGTCATAGATGAAGCTGGACAGGCAATTGAACCGTCATGCTGGATTCCTATATTGCAGGCTAAACGCTGCATTCTTGCTGGTGATCAATGCCAACTAGCTCCTGTGATATTTTCTAGAAAGGCATTAGAAGGTGGTTTAGGAATATCGCTACTTGAGAGAGCTGCAACTCTGCATGAAGGGATTCTCACCACTAGGTTAACGACACAATACCGTATGAATGATGCCATTGCAAGTTGGGCTTCAAAGGAGATGTATGGAGGATTGTTGAAGTCCTCAAAGACTGTCTTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCCTACATGGATAACACAGTGCCCTCTGCTACTGCTTGACACTCGAATGCCGTACGGAAGTCTATCAATTGGTTGTGAAGAGCATCTAGATCAGGCTGGAACAGGCTCGTTGTATAATGAAGGAGAAGCTGATATAGTTTTGCAGCATGTATTTTCCTTAATTTATGCAGGTGTTAGCCCAAATGCTATTGTAGTTCAGTCCCCTTATGTTGCTCAAGTTCAACTTTTGAGGGACATGCTTGACGGAGTTCCTGAAGCTGCCGGTACTGAAGTTTCCACAATTGATAGTTTTCAAGGTCGGGAAGCTGATGCTGTAATTCTATCAATGGTACGATCAAACACATTGGGAGCTGTTGGATTCCTCGGCGATAGCAGAAGAATCAATGTTGCCATCACAAGAGCACGCAAACATTTAGCCGTGGTCTGTGACAGCTCAACTATATGCCACAACACGTTCCTAGCAAGACTTATGCGCCATATTCGACACTTTGGTAGGGTGAAGCATGTAGAACCAGATAGCTTTGGAGGAGGGTTTGGACTTGGGATGAATCCAATACTACCTTCTATGGATTAG 2862 0.4137 MEATSTCFFCGRIPSKSKLSSSSSFGSFCLLTRNNVTTIMCKTSLKTHNRVIQSITNSNETKVPSTTKRRRRRRKNDVAIEIQLPFENMNKNVHVHENIGDPIGWKDVGKSVVSWIRESMKAMAFDIASAELLEDLEFSEMKQRMGPGLTFVIQAQPYLNAVPMPLGLEVTCLKACTHYPTLFDHFQRELRDVLQDMQSKGLVEDWRETQSWKLLKELANSAQHRAVARKITQPKSVQGVLGLDRERVKAIQQRIDEFTKNMSELLNIERDVELEFTQEELDAVPKPDDASDPSKPIEFLVSHSQPQQELCDTICNLNAISTSTGLGGMHLVLFKIEGNHRLPPTTLSPGEMVCVRTCDSKGAVTTSCMQGVVENLGDDGYSITVALESRHGDPTFSKLFGKNVRIDRIQGLADTLTYERNCEALMLLQKNGLQKKNPSISVVATLFGEGEDAAWLEKNGLVDWKEEKTNGVSGSESFDKSQQRAIALGLNKKRPLLVIQGPPGTGKTGLLKQLIARAVEQGEKVLVTAPTNAAVDNMVEKLSNVGINIVRVGNPARISKTVASKSLGEIVNAKLSSFREECERKKSDLRKDLRHCLKDDSLAAGIRQLLKQLAKSLKKKEKETINEVLSSAQVVLATNTGAADPMIRKLNAFDLVVIDEAGQAIEPSCWIPILQAKRCILAGDQCQLAPVIFSRKALEGGLGISLLERAATLHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSKTVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSIGCEEHLDQAGTGSLYNEGEADIVLQHVFSLIYAGVSPNAIVVQSPYVAQVQLLRDMLDGVPEAAGTEVSTIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHLAVVCDSSTICHNTFLARLMRHIRHFGRVKHVEPDSFGGGFGLGMNPILPSMD* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4446 953 CDD DEXXQc_SMUBP2 477 727 - -
Mal1g4446 953 Gene3D - 306 412 - -
Mal1g4446 953 Gene3D - 413 710 IPR027417 -
Mal1g4446 953 Coils Coil 603 627 - -
Mal1g4446 953 Gene3D - 726 935 IPR027417 -
Mal1g4446 953 Coils Coil 248 268 - -
Mal1g4446 953 Pfam AAA domain 478 695 IPR041677 GO:0004386
Mal1g4446 953 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 45 952 - -
Mal1g4446 953 Pfam AAA domain 704 907 IPR041679 -
Mal1g4446 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 915 IPR027417 -
Mal1g4446 953 SMART ultradead3 474 726 IPR014001 -
Mal1g4446 953 Coils Coil 579 599 - -
Mal1g4446 953 CDD SF1_C_Upf1 728 924 IPR041679 -
Mal1g4446 953 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 45 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4446 Mal-Chr1 103239496 103244789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4446 459 667 Core DNA Replication Machinery Family AT1G08840 25.837 4.86e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4446 - - aip:107625008 1477.23