Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4445 ATGGCCCAATCTCTAGTATTCAAAGTGAAGAGGCGTGACCCTGAATTGATAAAACCATCAAAACCAACACCTCATGAAATAAAACTACTCTCAGACATAGATGACCAAGATTCATTACGTTGGCAAGTTCCTTTGATACAATTTTACAATTATGATCCAAATATGGCAGGGAAAGACCCTGTTGATGTTATTAGAAAAGCATTAGCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTAAGGGAAGGTCCAAATAGGAAACTTATGGTTGATTGTAATGATGAAGGTGTTTTGTTTATTGAAGCTGATGTTACTTTGAAACAATTTGGTGATGCTCTTCATCCTCCATTTCCTTGCATAGATGAGCTTCTTCATGATGTTCCTGGTTCTTCAGATATGCTTAACACTCCATTGCTGCTTGTTCAGGTAACACGCCTCAAGTGTGGTGGTTTCATTTTTGCTTTTCGTATTAACCATACAATGAGTGATGGATCAGGTATTGTTCAATTTTTGAGTTCCGTAGGAGAAATATCTCGCGGTATGAGTGAACCTTCAATCTCACCAATGTGGTGTAGAGAGCTTCTTAATGCAAGGGACCCACCAAGGGCTACGTGTACTCATCGTGAATACGAACCCGCACCCGAAAACAAAAGAGCCATCTTTCCCTTAGACGATATGGTCCACCGCACTTTCTTCATTGGTCCCACCGAGGTAGCCGCAATTCGCTCTCTCCTTCCACCTCACCAATTACAACAACACTCCAATTTTGAAATCATAGCCGCATACTTTTGGCGTTGTCGTACAATAGCGTTACAACTAGATACTGACGAAGAAGTTCGCATAATCTGCATAGTCAATGCACGTAGCAAATTTGTCGACCTACTATTACCAGATGGTTACTATGGTAACGCTATAGCATTTCCCGTTGCCATTGCAACTGCAGGAAACCTAATTCAAAATCCGTTGGCATATGCATTGGATTTAGTTAAGAAAGCAAAAGCTAATGTCACCAAAGAGTATATGCATTCAGCGGTAGATTTTATGGTTATCAAGGGTCGACCTCATTTAAATATGGGGAGATTGTATTTAGTGTCTGATATTACACGTGCTGGATTTACAGAAGTTGATTTTGGTGATGTTGCCATTCCTGGCCAAAATGTCTTACATATACCTTTCAAAAATGCTAAAGGTGAGGATGGTTTGGTGATACTAGTTTTTTTGCCAACTCAAGTCATGGAGAGGTTGGTTAAAGAGTTAGATAGTGTGCTTAAGGGTGATCCAAAATCTGGTGTCATTAACTCTTCGTTGTAG 1317 0.3979 MAQSLVFKVKRRDPELIKPSKPTPHEIKLLSDIDDQDSLRWQVPLIQFYNYDPNMAGKDPVDVIRKALAKTLVFYYPFAGRLREGPNRKLMVDCNDEGVLFIEADVTLKQFGDALHPPFPCIDELLHDVPGSSDMLNTPLLLVQVTRLKCGGFIFAFRINHTMSDGSGIVQFLSSVGEISRGMSEPSISPMWCRELLNARDPPRATCTHREYEPAPENKRAIFPLDDMVHRTFFIGPTEVAAIRSLLPPHQLQQHSNFEIIAAYFWRCRTIALQLDTDEEVRIICIVNARSKFVDLLLPDGYYGNAIAFPVAIATAGNLIQNPLAYALDLVKKAKANVTKEYMHSAVDFMVIKGRPHLNMGRLYLVSDITRAGFTEVDFGDVAIPGQNVLHIPFKNAKGEDGLVILVFLPTQVMERLVKELDSVLKGDPKSGVINSSL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4445 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 427 - -
Mal1g4445 438 Pfam Transferase family 8 417 - -
Mal1g4445 438 PANTHER ALCOHOL ACYLTRANSFERASE 7 427 - -
Mal1g4445 438 Gene3D - 210 421 IPR023213 -
Mal1g4445 438 Gene3D - 6 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4445 Mal-Chr1 103157769 103159754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4445 8 353 Monolignol Biosynthesis Gene Families AT5G48930 30.595 1.73e-45 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4445 K19861 - mtr:MTR_1g040320 623.624