Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4444 ATGGCCCATTCTCTAGTATTCACAGTGAAGAGGCATGCCCCTGAATTTGTAAAGCCATCAAAACCAACACCTCATGAAATAAAATTACTTTCAGACATAGATGACCAAGAGGGATTACGTTTTCAAATTCCTGTGATACAATTTTATAAATATGATCCAAATATGAAAGGGAAAGACCCTGTTGATGTTATTAGAAAAGCATTAGCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTGAGGGAGGGTGCAAATAGGAAACTTATGGTTGATTGTAATGATGAAGGTGTTTTGTTTATTGAAGCTGATGCTGATGTTACTTTGAAACAATTTGGTGATGCTCTTCAACCTCCTTTTCCTTGTTTGGATGAGCTTCTTTTTGATGTTCCTGGTTCTTCAGATGTGCTTAACACTCCATTGTTGGTGTTTCAGGTAACACGTCTTAAGTGTGGTGGTTTCATTTTCGCTCTTCGTCTAAACCATACAATGAGCGATGCTGCGGGTTTGGTCCAATTCATGAGCGCTTTAGGCGAAATTTCTCGCGGGATGAATGAACCTTCAATATCACCAGTATGGCATAGAGAGCTTCTAAACGCAAGGGATCCACCAAGAGTAACATGTACTCATCGTGAATACGAACAAGTTCCTGACACCAAAGGAACAATTATCCCTTTAGATGACATGGCCCACCGCTCTTTTTTCTTTGGTCCCACTGAGGTAGCCGCAATTCGCGCTCTCCTCCCACCTCACCAACAACAACAGTCTAGTTTCGAAATCCTCACTGCATGCCTTTGGCGTTGTCGTACAATCGCATTAGAACCAGACACCGACGAAGAAGTTCGCATAATCTGCATTGTCAACGCTCGTGGCAGGTTTAATCCACCGTTACCAAACGGTTACTACGGTAATGCTTTTGCGTTTCCTGTTGCAGTTACAACTGCCGGGAAACTAATTGAAAATCCGTTGGGGTATGCACTAGAGTTAGTTAAAAAAGCAAAATCTGATGTAACTCAAGAGTATATGCATTCAGTTGCGGATTTAATGGTTACCAATGGCCGACCTCATTTCACTGTGGTAAGATCATATCTAGTGTCTGACGTGACACGTGCCGGATTCGGAGAGGTTGAGTTTGGTTGGGGGAAAGCTCTTTATGGAGGACCAGCTAAAGGAGGAGTTGGGGCTATACCTGGTGTTGCTAGCTTTTATATACCTTTTAAAAATGCTAAAGGAGAAGAAGGTTTAGTTATACCTGTTTGTTTGCCAAGTCAAGCAATGGAAAAGTTCGTCAAAGAGTTAGATAGTGTGCTTAAGAACAACATTAACCAACCTACTATAGGTGGTCCAAAATCTAGTTTCATTATTTCTTCTTTGTAG 1380 0.4116 MAHSLVFTVKRHAPEFVKPSKPTPHEIKLLSDIDDQEGLRFQIPVIQFYKYDPNMKGKDPVDVIRKALAKTLVFYYPFAGRLREGANRKLMVDCNDEGVLFIEADADVTLKQFGDALQPPFPCLDELLFDVPGSSDVLNTPLLVFQVTRLKCGGFIFALRLNHTMSDAAGLVQFMSALGEISRGMNEPSISPVWHRELLNARDPPRVTCTHREYEQVPDTKGTIIPLDDMAHRSFFFGPTEVAAIRALLPPHQQQQSSFEILTACLWRCRTIALEPDTDEEVRIICIVNARGRFNPPLPNGYYGNAFAFPVAVTTAGKLIENPLGYALELVKKAKSDVTQEYMHSVADLMVTNGRPHFTVVRSYLVSDVTRAGFGEVEFGWGKALYGGPAKGGVGAIPGVASFYIPFKNAKGEEGLVIPVCLPSQAMEKFVKELDSVLKNNINQPTIGGPKSSFIISSL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4444 459 Gene3D - 215 434 IPR023213 -
Mal1g4444 459 Gene3D - 8 214 IPR023213 -
Mal1g4444 459 PANTHER - 8 443 - -
Mal1g4444 459 Pfam Transferase family 12 434 - -
Mal1g4444 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4444 Mal-Chr1 103099504 103102341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4444 17 434 Monolignol Biosynthesis Gene Families AT5G48930 29.817 6.54e-48 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4444 K19861 - gmx:100797017 785.023