Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4428 ATGACAACATCTAACACACATTTATGCATTTTCATTATGATGATGCTCATGTTCATCATTGGAGTAAATTCAAATTTGGAAGCTGACAGGATCACTATCTTACCGGACCAGCCCAAGGTTAACTTCCAACAATTTGCTGGACACATAACCATCGATGAATCCCATCAGAGAGCCCTCTTCTACTATTTTGTAGAAGCAGAGGTTGATCCTGCTTCAAAACCGGTAGTACTATGGTTAAACGGAGGACCTGGCTGTTCCTCAGTAGGCCAAGGGGCCTTTTCAGAGCATGGTCCTTTCAAACCAACAAGGAAGGGTCGTCTTGTGAAAAACCCCTTCAGTTGGAACAGAGTAGCTAACATGATCTACTTAGACTCTCCAATTGGTGTTGGCTTCTCATATTCAGCTAACAAGTCTGATTACTTTCTTGTGAATGACAAAATTACAGCAAGGGACAACTTGTTGTTTCTCCAGGGCTGGTTCTCCAGATTCCCTATGTATCAAAGCAATGACTTTTTCATCACTGGAGAAAGCTACGCAGGTCACTTTGCACCCCAGCTTGCGGAGCTAATCCTCCAAACCAAAGCCAACATAAGATTGAAGGGGATAGCCATAGGAAATCCCCTACTTGAATTCGATACAGATTTTAGCAGTGGAGCTGAGTTTTTGTGGTCTCACGGAGAGATTCAAGATTCAACATATCAAATGTTGAAAACAGTATGCAGCTATGCCGACATTAAGAGACAGAGTCGGACTGGGAAACTGAGTAACGTGTGCTTTAAAGTAAATCGGCAATTGTCAATGGAGGTTTCTGCATATATTGATGCAATGGATGTAACGCTTGATGTCTGTCCACCACCAGGAAAACAACAGGCATATGTGTTGACTCAACTGCAAGCTGGAGAGAAGATAGATGTGTGTGTGGGAGATGAAACACTCACATATCTAAATAGGAAAGAAGTGCGGAAGGCAATGCATGCGCAGCTTGTGGGAAATTGGTCAACATGTACTTCGGTTATGGTATATGATTTTCAGAACCTTGAGAATCCTACCATCTCTATGCTAGGGACACTTGTTAAGTCAGGTGTTAGGGTTCTAGCATACAGTGGTGACCAAGATTCAGTCATACCATTGACTGGGACAAGATCTTTAGTGATCGGATTGGCCAAAGAACTGGGGTTGAATACAACAGGGGCCTATAGACCTTGGTTTAAGGGAGGACAGGTTGCTGGATCGACCCAAGTATATGGGGACATCCTGGCCTTTGCAACAATCAGAGGAGCAGGTCATGCAGCTCCTTCTTCTCAACCAAGGAGGTCTCTAGAGCTTTTCAAGGCCTTTTTGGAAGGAAAACAACTTCCAAAACATTGA 1368 0.4349 MTTSNTHLCIFIMMMLMFIIGVNSNLEADRITILPDQPKVNFQQFAGHITIDESHQRALFYYFVEAEVDPASKPVVLWLNGGPGCSSVGQGAFSEHGPFKPTRKGRLVKNPFSWNRVANMIYLDSPIGVGFSYSANKSDYFLVNDKITARDNLLFLQGWFSRFPMYQSNDFFITGESYAGHFAPQLAELILQTKANIRLKGIAIGNPLLEFDTDFSSGAEFLWSHGEIQDSTYQMLKTVCSYADIKRQSRTGKLSNVCFKVNRQLSMEVSAYIDAMDVTLDVCPPPGKQQAYVLTQLQAGEKIDVCVGDETLTYLNRKEVRKAMHAQLVGNWSTCTSVMVYDFQNLENPTISMLGTLVKSGVRVLAYSGDQDSVIPLTGTRSLVIGLAKELGLNTTGAYRPWFKGGQVAGSTQVYGDILAFATIRGAGHAAPSSQPRRSLELFKAFLEGKQLPKH* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4428 455 SUPERFAMILY alpha/beta-Hydrolases 39 452 IPR029058 -
Mal1g4428 455 Gene3D alpha/beta hydrolase 24 454 IPR029058 -
Mal1g4428 455 ProSitePatterns Serine carboxypeptidases, histidine active site. 419 436 IPR033124 GO:0004185
Mal1g4428 455 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Mal1g4428 455 Pfam Serine carboxypeptidase 38 449 IPR001563 GO:0004185|GO:0006508
Mal1g4428 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 419 432 IPR001563 GO:0004185|GO:0006508
Mal1g4428 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Mal1g4428 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Mal1g4428 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Mal1g4428 455 PANTHER CARBOXYPEPTIDASE 19 440 - -
Mal1g4428 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 440 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4428 Mal-Chr1 102748947 102752148 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4428 314 452 Calmodulin-binding Proteins AT2G22960 29.787 5.69e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4428 K16297 - gmx:100805028 617.461