Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4407 ATGACAACATCTAACACCCATTTCAGCATTTTCTTTATGATTCTTCTCATATTCATTCTTGGAGGAGTAGTGAATTCAACTTTGGAAGCTGATAAGATCAAAACATTACCGGAGCAGCCCAAAGTTAAATTCCAGCAATTTTCTGGCCACATATTCATTGATGAAACCCACCAGAGAGCCCTCTTCTACTATTTCGTAGAAGCAGCGGTTGATCCTGCTTCAAAACCAGTTGTACTCTGGTTAAACGGAGGACCTGGCTGTTCCTCAGTAGGCCAAGGGGCCTTTTCAGAGCACGGTCCTTTCAAACCAACAAGGAAGGGTCGTCTTGTGAAAAACCCCTTCAGTTGGAACAAAGTAGCTAACATGATCTACTTAGACTCTCCAATTGGTGTTGGCTTCTCATATTCAGCCAACAAGTCTGATTACTATCTTGTGAATGACCAAATTACAGCAAGGGATAACCTGTTGTTTCTCCAGGGCTGGTTCTCCAGATTCCCTATGTATCAAAGCAATGATTTCTTCATCACCGGAGAAAGCTACGCAGGTCACTTTGCCCCCCAGCTTGCGGAGCTAATCCTCCAAACCAAAGCCAACATAAGACTGAAGGGGATAGCCATAGGAAATCCCCTTCTTGAATTCAATACAGACTTCAACAGTGGAGCTGAGTTTTTGTGGTCTCACGGAGAGATTCAAGATTCAACATATGAAATGTTGAAAACAGTATGCAGCTATGCCGACATTAAGAGACAGGGTCGGACTGGCAAACTCGGTAACGCCTGTGATAAAGTAAATCTGCAATTGTCAATGGAGGTTAGTGCATATACTGATGCAATGGATGTAACAATTGATATCTGTCCACCACCAGGAAAACAACAGGCATATGTGTTGACTCAACTGCAAGCTGGAGAGAAGATAGATGTGTGTGTAGGAGATGCAACATTCACATATCTAAATAGGAAAGACGTGCGGAAGGCACTGCATGCGCAGCTTGTGGGAAATTGGTCAACATGTACTTCGGTTATGGTATATGATTTTCAGAACCTTGAGAATCCAACCATCTCTATGCTAGGGGCACTTGTTAAGTCAGGTGTTAGGGTTCTAGCATACAGTGGTGACCAAGATTCAGTCATACCATTGACTGGGACAAGAACTTTAGTGATCGGATTGGCCAAAGAACTGGGGTTGAACACAACAGGGGCCTATAGACCTTGGTTTAAGGGAGGACAGGTTGCTGGATCGACCCAAGTATATGGGGACATCCTGGCCTTTGCAACAATCAGAGGAGCAGGTCATGCAGCTCCCTCTTCTCAACCAGGAAGGTCTCTAGAGCTTTTCAAGGCCTTTTTGGAAGGAAAACAACTTCCAAAACATTGA 1374 0.441 MTTSNTHFSIFFMILLIFILGGVVNSTLEADKIKTLPEQPKVKFQQFSGHIFIDETHQRALFYYFVEAAVDPASKPVVLWLNGGPGCSSVGQGAFSEHGPFKPTRKGRLVKNPFSWNKVANMIYLDSPIGVGFSYSANKSDYYLVNDQITARDNLLFLQGWFSRFPMYQSNDFFITGESYAGHFAPQLAELILQTKANIRLKGIAIGNPLLEFNTDFNSGAEFLWSHGEIQDSTYEMLKTVCSYADIKRQGRTGKLGNACDKVNLQLSMEVSAYTDAMDVTIDICPPPGKQQAYVLTQLQAGEKIDVCVGDATFTYLNRKDVRKALHAQLVGNWSTCTSVMVYDFQNLENPTISMLGALVKSGVRVLAYSGDQDSVIPLTGTRTLVIGLAKELGLNTTGAYRPWFKGGQVAGSTQVYGDILAFATIRGAGHAAPSSQPGRSLELFKAFLEGKQLPKH* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4407 457 ProSitePatterns Serine carboxypeptidases, histidine active site. 421 438 IPR033124 GO:0004185
Mal1g4407 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 442 IPR001563 GO:0004185|GO:0006508
Mal1g4407 457 Pfam Serine carboxypeptidase 40 451 IPR001563 GO:0004185|GO:0006508
Mal1g4407 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Mal1g4407 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 421 434 IPR001563 GO:0004185|GO:0006508
Mal1g4407 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Mal1g4407 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Mal1g4407 457 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Mal1g4407 457 SUPERFAMILY alpha/beta-Hydrolases 35 454 IPR029058 -
Mal1g4407 457 Gene3D alpha/beta hydrolase 24 456 IPR029058 -
Mal1g4407 457 PANTHER CARBOXYPEPTIDASE 22 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4407 Mal-Chr1 102131445 102135603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4407 309 454 Calmodulin-binding Proteins AT2G22960 30.405 2.25e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4407 K16297 - gmx:100805028 610.142