Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4398 ATGTCGTGTTTACTTTTATTCTTTTGTGTGTTTGTAATGGCCACATCAGTTCATGCTGTAATAAAATTCCAAGTCAGTGAGGCAGATGCTCTGTTGAAGTGGAAAGCAAGCCTTGACAACCGTAGCAAGGCTTTGCTCTCTTCATGGATTGGTAATAACCCTTGTAGTTGGGAAGGAATCACATGTGATGATGAGTCAAAATCCATTAACAAGGTAAATCTCACCAATATTGGACTAAAAGGTACGCTTAAAAGTTTCAATTTCTCATCACTTCCAAAAATTCGCAGCTTAGTTTTAAGAAACAACTCCTTGTATGGCGTTGTTCCACACCATATTGGAGAGATGTCTAGTCTGAACACTCTTGATTTGTCAATTAACATTCTCTTTGGATCAATCCCACCATCCATAGGTCATTTGGTCAATTTGAATTCTATTCTTCTTAATGATAATAAACTCTCTGGACATATTCCACCTTCCATAGGTAACTTAGTCAATTTAAATACTATTTACCTTTATGGAAATAAACTCTCTGGACCAATTCCTTCTACTATCGGAAACTTAACGAAAGTAAGTGAATTATCTTTTTACTCAAATGCTCTCACTGGACAAATTCCACCTTCAATAGGTAACCTGGTCAATTTAGATATTATGGACCTTTATGGTAATCAACTCTGTGGACCAATTCCTTCCACTATTGGAAATTTAACGAAAGTAAGTGCATTATCTCTTTTATCAAATGACCTCACTGGCAATATACCTACAGAAATTAATAGGCTTAACAATTTGGAAATTCTGCAGTTAGGTGATAATAATTTCATAGGTCATTTACCTCACAATATATGTTTTAGTGGAAAGTTAACTATGTTCTCCGCTAGAAATAACGAGTTCACAGGTCCAATTCCAGAGAGTTTGAAGAATTGTTCAAGTCTAAAGAGAGTGAGACTTGAACAAAACCAACTTACTGGAAATATAACAGATAGCTTTGGTGTGTATCCCAAATTGTACTACATGGAATTGAGTGGTAATAAATTTTATGGTCATATTTCACCTAATTGGGGAAAATGCAAGAATCTCACAAGCCTAAAAATCTCCAACAATAATTTAACAGGAAGTATACCACAAGAATTGGCTGGGGCATCCAATTTACATATACTTGACTTGTCCGCGAATCAACTTACAGGAGAAATTCCAAAGGAGCTAGGTAGCTTATCTTCATTGATCCAACTCTCGATAAGTAGCAATTATTTTTCAGGAGAACTTCCTGTACAAATTACCTCATTGAAGGAACTAGCTATCTTGGAGATGGCAACAAATAATTTAAGTGGCTTAATCCCAAAACAACTTGGAAGATTACTTATGTTATTGCACTTGAATTTGAGCCAAAATAAGTTTGAAGGAAACATTCCTGATGAGATTGGGCAGTTAAAAGTTATCGAAAATCTTGATCTTAGTGGGAATTCTTTGAATGGAACTATACCAACAATGCTTGGACAGTTAAATCGCTTAGAAACATTGAATCTCTCACATAATGATCTTTCTGGTACCATTCCCTTGACTTATGGTGAGATGTCAGGCTTGACAACTGTTGACATATCATACAACAAATTGAAGGGTCCAATTCCAAGCATCCCAGCCTTCCAAAAAGCTCCAATCGAAGCATTGATAAATAACAAAGGCTTGTGTGGTAATGTCTCTGGCTTAGAGCCTTGCTCAATATCAGGTGGAAACTTTCATAGTCATAAGACTAACAAAACTTTGGTGCTAGTTTTACCCCTAACTCTAGGCACTCTATTGTTAGCACTATTTGTTTATGGGCTCTCATACCTTTTCTGCCGAACTTCAAGCACAAAAGAACACAAGCCGGCAGAAGAATTTCAAACTGAAAATCTATTTTCAATATGGAGCTTTGATGGCAAAATGGTGTATGAGAACATAATCAAATCCACGGAAGATTTTGACAACAAGCATCTCATTGGGGTTGGAGGACATGGAAGTGTTTACAAAGCAGAGTTGCCTACAGGTCAAGTGGTAGCTGTGAAGAAACTTCATTCATTACCGAATGGAGAAGTATCTAATATAAAATCTTTTTCAACAGAGATTAGTGCTTTGACAGAGCTCCGACATCGCAACATTGTCAAGTTATATGGATTTTGTTCACATCCACTACACTCGTTTTTGGTTTATGAATTCTTGGAGAAGGGTAGCGTGGACAATGTTTTGAAGGATAATGAACAAGCTGATAAATTTGATTGGAATAGGAGAGTAAATGTCATTAAAGATGTAGCTAATGCTTTATGCTATCTGCATCATGATTGCTCACCTCCTATTGTTCATCGTGATATATCAAGCAAGAATGTTATTTTAGATTTGGAATATGTAGCTCATGTCTCGGACTTCGGAACATCTAAGTTTCTAAGTCTCAATTCATCCAATATGACTTCTTTTGCAGGCACCTTTGGATATGCAGCTCCAGAACTTGCATACACAATGGAAGTAAATGAGAAATGTGATGTGTATAGTTTTGGGGTATTAACCTTGGAAATACTTTTTGGAAAGCACCCTGGAGATGTGGTAACTTCTTTGTGGCAACAACCTTCACAAAGTGTTATGGACCTGACAGTTGATACTATGCCATTGATAGATAACTTGGACAAACGTCTCCCTCATCCTGCAAATACCATTGTTCAAAAGGTAGCCTCAATGATAAGGATTGCAATTGCTTGCTTAACTGAAAGCCCGCATTTTCGCCCTACCATAGAGCAGGTTTGCAAGCAGCTTGTAATATCATAA 2790 0.3685 MSCLLLFFCVFVMATSVHAVIKFQVSEADALLKWKASLDNRSKALLSSWIGNNPCSWEGITCDDESKSINKVNLTNIGLKGTLKSFNFSSLPKIRSLVLRNNSLYGVVPHHIGEMSSLNTLDLSINILFGSIPPSIGHLVNLNSILLNDNKLSGHIPPSIGNLVNLNTIYLYGNKLSGPIPSTIGNLTKVSELSFYSNALTGQIPPSIGNLVNLDIMDLYGNQLCGPIPSTIGNLTKVSALSLLSNDLTGNIPTEINRLNNLEILQLGDNNFIGHLPHNICFSGKLTMFSARNNEFTGPIPESLKNCSSLKRVRLEQNQLTGNITDSFGVYPKLYYMELSGNKFYGHISPNWGKCKNLTSLKISNNNLTGSIPQELAGASNLHILDLSANQLTGEIPKELGSLSSLIQLSISSNYFSGELPVQITSLKELAILEMATNNLSGLIPKQLGRLLMLLHLNLSQNKFEGNIPDEIGQLKVIENLDLSGNSLNGTIPTMLGQLNRLETLNLSHNDLSGTIPLTYGEMSGLTTVDISYNKLKGPIPSIPAFQKAPIEALINNKGLCGNVSGLEPCSISGGNFHSHKTNKTLVLVLPLTLGTLLLALFVYGLSYLFCRTSSTKEHKPAEEFQTENLFSIWSFDGKMVYENIIKSTEDFDNKHLIGVGGHGSVYKAELPTGQVVAVKKLHSLPNGEVSNIKSFSTEISALTELRHRNIVKLYGFCSHPLHSFLVYEFLEKGSVDNVLKDNEQADKFDWNRRVNVIKDVANALCYLHHDCSPPIVHRDISSKNVILDLEYVAHVSDFGTSKFLSLNSSNMTSFAGTFGYAAPELAYTMEVNEKCDVYSFGVLTLEILFGKHPGDVVTSLWQQPSQSVMDLTVDTMPLIDNLDKRLPHPANTIVQKVASMIRIAIACLTESPHFRPTIEQVCKQLVIS* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4398 929 ProSitePatterns Protein kinases ATP-binding region signature. 658 681 IPR017441 GO:0005524
Mal1g4398 929 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 129 929 - -
Mal1g4398 929 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 139 - -
Mal1g4398 929 Gene3D Ribonuclease Inhibitor 241 572 IPR032675 -
Mal1g4398 929 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 129 929 - -
Mal1g4398 929 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 139 - -
Mal1g4398 929 Gene3D Phosphorylase Kinase; domain 1 612 730 - -
Mal1g4398 929 SUPERFAMILY L domain-like 52 253 - -
Mal1g4398 929 Pfam Leucine rich repeat 332 392 IPR001611 GO:0005515
Mal1g4398 929 ProSitePatterns Tyrosine protein kinases specific active-site signature. 776 788 IPR008266 GO:0004672|GO:0006468
Mal1g4398 929 Pfam Protein kinase domain 653 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4398 929 SUPERFAMILY Protein kinase-like (PK-like) 632 926 IPR011009 -
Mal1g4398 929 SUPERFAMILY RNI-like 218 538 - -
Mal1g4398 929 ProSiteProfiles Protein kinase domain profile. 652 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4398 929 SMART LRR_typ_2 380 403 IPR003591 -
Mal1g4398 929 SMART LRR_typ_2 499 523 IPR003591 -
Mal1g4398 929 SMART LRR_typ_2 451 475 IPR003591 -
Mal1g4398 929 SMART LRR_typ_2 139 163 IPR003591 -
Mal1g4398 929 SMART LRR_typ_2 211 235 IPR003591 -
Mal1g4398 929 SMART LRR_typ_2 259 283 IPR003591 -
Mal1g4398 929 SMART LRR_typ_2 91 115 IPR003591 -
Mal1g4398 929 PRINTS Leucine-rich repeat signature 478 491 - -
Mal1g4398 929 PRINTS Leucine-rich repeat signature 499 512 - -
Mal1g4398 929 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Mal1g4398 929 Gene3D Transferase(Phosphotransferase) domain 1 731 928 - -
Mal1g4398 929 Gene3D Ribonuclease Inhibitor 24 240 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4398 Mal-Chr1 101728389 101731341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4398 88 824 Receptor kinase-like Gene Family AT4G08850 44.758 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal1g4398 Pkinase 9.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4398 - - mtr:MTR_0365s0020 1273.84