Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4395 ATGGAATTCAAGGCTACTGAGCTTAGATTGGGATTACCAGGGACAGATGAAAAGGAGATGAAAACAATACATGGTAGTGTTGTTAAGAATAATAAAAGACAATTACCTCAAACTTCTGAAGATTCTGTTTCAATTTCTAAGGTTTCAAATGATGATCAGCATGTGGAGAGTTCTTCTGCTGCACCTCCTGCCAAGGCAAAGATAGTTGGGTGGCCACCAATAAGATCTTACAGGAAAAACACTTTGCAAGAGGCTGAAGTTGGTGGGATCTATGTGAAAGTTAGCATGGATGGAGCTCCTTATCTTAGAAAGATTGACTTAAGGGTCTATGGAGGCTACCCTGAACTTCTCAAAGCTCTAGAAACCATGTTCAAGTTGACCATAGGTGAGTATTCTGAAAGAGAGGGTTATAAGGGATCTGAATATGCACCAACCTATGAAGACAAGGATGGTGACTGGATGCTAGTTGGAGATGTTCCATGGGACATGTTTGTGACTTCCTGCAAAAGGCTAAGAATCATGAAAGGCACAGAAGCTAGAGGTTTGGGTTGTGGTGTATGA 561 0.4135 MEFKATELRLGLPGTDEKEMKTIHGSVVKNNKRQLPQTSEDSVSISKVSNDDQHVESSSAAPPAKAKIVGWPPIRSYRKNTLQEAEVGGIYVKVSMDGAPYLRKIDLRVYGGYPELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEARGLGCGV* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4395 186 Gene3D - 83 186 - -
Mal1g4395 186 MobiDBLite consensus disorder prediction 1 62 - -
Mal1g4395 186 MobiDBLite consensus disorder prediction 27 57 - -
Mal1g4395 186 PANTHER AUXIN-INDUCED PROTEIN 1 183 - -
Mal1g4395 186 MobiDBLite consensus disorder prediction 1 26 - -
Mal1g4395 186 SUPERFAMILY CAD & PB1 domains 82 175 - -
Mal1g4395 186 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 183 IPR003311 GO:0005634|GO:0006355
Mal1g4395 186 Pfam AUX/IAA family 6 183 IPR033389 -
Mal1g4395 186 ProSiteProfiles PB1 domain profile. 89 176 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4395 Mal-Chr1 101677723 101679583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4395 92 182 B3 DNA Binding Superfamily AT2G46530 37.363 1.78e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Mal1g4395 AUX_IAA 6.8e-53 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4395 K14484 - gmx:100800212 301.982